RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 BAALCQ8WXS3 180 aa10.85□□□□□ -0.67
NEK9-204ENST00000554258 CDC42SE2Q9NRR3 84 aa10.85□□□□□ -0.67
NEK9-204ENST00000554258 SPANXA1Q9NS26 97 aa10.85□□□□□ -0.67
NEK9-204ENST00000554258 CYSLTR1Q9Y271 337 aa10.85□□□□□ -0.67
NEK9-204ENST00000554258 A0A096LNJ9 63 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 LINC00310P59036 64 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
NEK9-204ENST00000554258 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
NEK9-204ENST00000554258 ENHOQ6UWT2 76 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 TOMM6Q96B49 74 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
NEK9-204ENST00000554258 IGIPA6NJ69 53 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 ANGP03950 147 aaKnown RBP10.83□□□□□ -0.68
NEK9-204ENST00000554258 NPSP0C0P6 89 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 BAGE3Q86Y29 109 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 LINC00269Q8N2A0 174 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 OR5A1Q8NGJ0 315 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 TMEM101Q96IK0 257 aa10.83□□□□□ -0.68
NEK9-204ENST00000554258 TRAV8-3A0A0A6YYJ7 113 aa10.82□□□□□ -0.68
NEK9-204ENST00000554258 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
NEK9-204ENST00000554258 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
NEK9-204ENST00000554258 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
NEK9-204ENST00000554258 DGAT2L7PQ6IED9 249 aa10.81□□□□□ -0.68
NEK9-204ENST00000554258 UBE2WQ96B02 151 aa10.81□□□□□ -0.68
NEK9-204ENST00000554258 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 SERF1AO75920 110 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 REG3AQ06141 175 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 MIAQ16674 131 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 ERASQ7Z444 233 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
NEK9-204ENST00000554258 NUPR1O60356 82 aa10.79□□□□□ -0.68
NEK9-204ENST00000554258 HBDP02042 147 aa10.79□□□□□ -0.68
NEK9-204ENST00000554258 Q6ZUT4 128 aa10.79□□□□□ -0.68
NEK9-204ENST00000554258 OPRPNQ99935 248 aaPredicted RBP10.79□□□□□ -0.68
NEK9-204ENST00000554258 TRAV8-4A0A0B4J246 113 aa10.78□□□□□ -0.68
NEK9-204ENST00000554258 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
NEK9-204ENST00000554258 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
NEK9-204ENST00000554258 HSBP1O75506 76 aa10.77□□□□□ -0.69
NEK9-204ENST00000554258 CRPP02741 224 aa10.77□□□□□ -0.69
NEK9-204ENST00000554258 PMCHL1Q16048 86 aa10.77□□□□□ -0.69
NEK9-204ENST00000554258 SCGB3A1Q96QR1 104 aa10.77□□□□□ -0.69
NEK9-204ENST00000554258 AMELXQ99217 191 aa10.77□□□□□ -0.69
NEK9-204ENST00000554258 CCL25O15444 150 aa10.76□□□□□ -0.69
NEK9-204ENST00000554258 CRCT1Q9UGL9 99 aa10.76□□□□□ -0.69
NEK9-204ENST00000554258 COX11Q9Y6N1 276 aa10.76□□□□□ -0.69
NEK9-204ENST00000554258 LINC00959A0A1B0GUT2 108 aa10.75□□□□□ -0.69
NEK9-204ENST00000554258 CLPSL2Q6UWE3 100 aa10.75□□□□□ -0.69
NEK9-204ENST00000554258 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
NEK9-204ENST00000554258 FAM19A2Q8N3H0 131 aa10.75□□□□□ -0.69
NEK9-204ENST00000554258 RMI2Q96E14 147 aa10.75□□□□□ -0.69
NEK9-204ENST00000554258 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
NEK9-204ENST00000554258 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
NEK9-204ENST00000554258 PAPPA-AS1Q5QFB9 102 aa10.74□□□□□ -0.69
NEK9-204ENST00000554258 ATP5LO75964 103 aa10.73□□□□□ -0.69
NEK9-204ENST00000554258 C1orf43Q9BWL3 253 aa10.73□□□□□ -0.69
NEK9-204ENST00000554258 VCX2Q9H322 139 aa10.73□□□□□ -0.69
NEK9-204ENST00000554258 IGKV2D-24A0A075B6R9 120 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
NEK9-204ENST00000554258 NDUFA6P56556 154 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 Q6ZN92 141 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 FAM19A3Q7Z5A8 133 aa10.72□□□□□ -0.69
NEK9-204ENST00000554258 SS18Q15532 418 aa10.71□□□□□ -0.69
NEK9-204ENST00000554258 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
NEK9-204ENST00000554258 CHCHD10Q8WYQ3 142 aaPredicted RBP10.71□□□□□ -0.69
NEK9-204ENST00000554258 IGLV10-54A0A075B6I4 117 aa10.7□□□□□ -0.7
NEK9-204ENST00000554258 TRAV13-1A0A0B4J241 112 aa10.7□□□□□ -0.7
NEK9-204ENST00000554258 IGKV3OR2-268A0A0C4DH90 116 aa10.7□□□□□ -0.7
NEK9-204ENST00000554258 UBE2D1P51668 147 aa10.7□□□□□ -0.7
NEK9-204ENST00000554258 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
NEK9-204ENST00000554258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
NEK9-204ENST00000554258 IFITM10A6NMD0 228 aa10.69□□□□□ -0.7
NEK9-204ENST00000554258 FOXI1Q12951 378 aa10.69□□□□□ -0.7
NEK9-204ENST00000554258 PMVKQ15126 192 aa10.69□□□□□ -0.7
NEK9-204ENST00000554258 CD164L2Q6UWJ8 174 aa10.69□□□□□ -0.7
NEK9-204ENST00000554258 IFI27L1Q96BM0 104 aa10.69□□□□□ -0.7
NEK9-204ENST00000554258 PACRGQ96M98 296 aaPredicted RBP10.69□□□□□ -0.7
NEK9-204ENST00000554258 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
NEK9-204ENST00000554258 LINC00242Q5T6M2 205 aa10.68□□□□□ -0.7
NEK9-204ENST00000554258 C2orf88Q9BSF0 95 aa10.68□□□□□ -0.7
NEK9-204ENST00000554258 GAGE12HA6NDE8 117 aa10.67□□□□□ -0.7
NEK9-204ENST00000554258 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
NEK9-204ENST00000554258 TRAV12-1A0A0B4J245 112 aa10.66□□□□□ -0.7
NEK9-204ENST00000554258 IGHV3OR16-9A0A0B4J2B5 98 aa10.66□□□□□ -0.7
NEK9-204ENST00000554258 XCL1P47992 114 aa10.66□□□□□ -0.7
NEK9-204ENST00000554258 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
NEK9-204ENST00000554258 PANO1I0J062 215 aa10.65□□□□□ -0.7
NEK9-204ENST00000554258 COX6A2Q02221 97 aa10.65□□□□□ -0.7
NEK9-204ENST00000554258 C14orf177Q52M58 125 aa10.65□□□□□ -0.7
NEK9-204ENST00000554258 PRSS1P07477 247 aa10.64□□□□□ -0.71
NEK9-204ENST00000554258 FABP4P15090 132 aa10.64□□□□□ -0.71
NEK9-204ENST00000554258 SEC11AP67812 179 aa10.64□□□□□ -0.71
NEK9-204ENST00000554258 TINCRA0A1B0GVN0 87 aa10.63□□□□□ -0.71
NEK9-204ENST00000554258 HIST3H2BBQ8N257 126 aa10.63□□□□□ -0.71
NEK9-204ENST00000554258 C5orf52A6NGY3 159 aa10.62□□□□□ -0.71
NEK9-204ENST00000554258 S100A6P06703 90 aa10.62□□□□□ -0.71
NEK9-204ENST00000554258 IGLC3P0DOY3 106 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms