RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 COX6A2Q02221 97 aa12.1□□□□□ -0.47
PSEN1-210ENST00000554131 PMVKQ15126 192 aa12.1□□□□□ -0.47
PSEN1-210ENST00000554131 C15orf56Q8N910 161 aa12.1□□□□□ -0.47
PSEN1-210ENST00000554131 Q8N814 137 aa12.09□□□□□ -0.47
PSEN1-210ENST00000554131 PKHD1P08F94 4074 aa12.08□□□□□ -0.48
PSEN1-210ENST00000554131 KRTAP10-2P60368 255 aa12.08□□□□□ -0.48
PSEN1-210ENST00000554131 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
PSEN1-210ENST00000554131 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
PSEN1-210ENST00000554131 LEPROTL1O95214 131 aa12.07□□□□□ -0.48
PSEN1-210ENST00000554131 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
PSEN1-210ENST00000554131 IGLV4-69A0A075B6H9 119 aa12.05□□□□□ -0.48
PSEN1-210ENST00000554131 COX7A2LO14548 114 aa12.05□□□□□ -0.48
PSEN1-210ENST00000554131 PRSS1P07477 247 aa12.05□□□□□ -0.48
PSEN1-210ENST00000554131 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
PSEN1-210ENST00000554131 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
PSEN1-210ENST00000554131 TINCRA0A1B0GVN0 87 aa12.04□□□□□ -0.48
PSEN1-210ENST00000554131 FUSP35637 526 aaKnown RBP eCLIP12.04□□□□□ -0.48
PSEN1-210ENST00000554131 SPATA12Q7Z6I5 190 aa12.04□□□□□ -0.48
PSEN1-210ENST00000554131 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-210ENST00000554131 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
PSEN1-210ENST00000554131 A0A087WZ39 114 aa12.03□□□□□ -0.48
PSEN1-210ENST00000554131 GVQW2A0A096LPI5 108 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-210ENST00000554131 EREGO14944 169 aa12.03□□□□□ -0.48
PSEN1-210ENST00000554131 IGLC3P0DOY3 106 aa12.03□□□□□ -0.48
PSEN1-210ENST00000554131 FABP4P15090 132 aa12.03□□□□□ -0.48
PSEN1-210ENST00000554131 PACRGQ96M98 296 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-210ENST00000554131 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
PSEN1-210ENST00000554131 HERVK_113P63121 156 aa12.02□□□□□ -0.49
PSEN1-210ENST00000554131 SEC11AP67812 179 aa12.02□□□□□ -0.49
PSEN1-210ENST00000554131 CDKN2A-AS1Q9UH64 79 aa12.02□□□□□ -0.49
PSEN1-210ENST00000554131 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
PSEN1-210ENST00000554131 SLPIP03973 132 aa12.01□□□□□ -0.49
PSEN1-210ENST00000554131 C14orf177Q52M58 125 aa12.01□□□□□ -0.49
PSEN1-210ENST00000554131 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
PSEN1-210ENST00000554131 IGLV2-33A0A075B6J2 118 aaPredicted RBP12□□□□□ -0.49
PSEN1-210ENST00000554131 ODF1Q14990 250 aa12□□□□□ -0.49
PSEN1-210ENST00000554131 HIGD2BQ4VC39 106 aa12□□□□□ -0.49
PSEN1-210ENST00000554131 CFAP161Q6P656 301 aa12□□□□□ -0.49
PSEN1-210ENST00000554131 LRP1BQ9NZR2 4599 aa11.99□□□□□ -0.49
PSEN1-210ENST00000554131 IGHV3-64A0A075B6Q5 118 aa11.99□□□□□ -0.49
PSEN1-210ENST00000554131 HIST3H2BBQ8N257 126 aa11.99□□□□□ -0.49
PSEN1-210ENST00000554131 GEMIN7Q9H840 131 aaKnown RBP11.99□□□□□ -0.49
PSEN1-210ENST00000554131 PGPEP1Q9NXJ5 209 aa11.99□□□□□ -0.49
PSEN1-210ENST00000554131 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
PSEN1-210ENST00000554131 hDV102S1A0JD36 115 aa11.98□□□□□ -0.49
PSEN1-210ENST00000554131 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
PSEN1-210ENST00000554131 MALP21145 153 aa11.98□□□□□ -0.49
PSEN1-210ENST00000554131 CDPF1Q6NVV7 123 aa11.98□□□□□ -0.49
PSEN1-210ENST00000554131 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
PSEN1-210ENST00000554131 MRPL35Q9NZE8 188 aaKnown RBP11.98□□□□□ -0.49
PSEN1-210ENST00000554131 F8VRH5 84 aa11.97□□□□□ -0.49
PSEN1-210ENST00000554131 ZNF22P17026 224 aaPredicted RBP11.97□□□□□ -0.49
PSEN1-210ENST00000554131 CNBPP62633 177 aaKnown RBP11.97□□□□□ -0.49
PSEN1-210ENST00000554131 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
PSEN1-210ENST00000554131 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
PSEN1-210ENST00000554131 LINC00469Q8N7U9 141 aa11.96□□□□□ -0.49
PSEN1-210ENST00000554131 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.49
PSEN1-210ENST00000554131 DNAH8Q96JB1 4490 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 IGLV5-52A0A0A0MRZ9 124 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 SMIM1B2RUZ4 78 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 H0Y8G0 127 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 APOMO95445 188 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 ORAOV1Q8WV07 137 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 MAP1LC3CQ9BXW4 147 aa11.95□□□□□ -0.5
PSEN1-210ENST00000554131 C5orf52A6NGY3 159 aa11.94□□□□□ -0.5
PSEN1-210ENST00000554131 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
PSEN1-210ENST00000554131 S100A6P06703 90 aa11.93□□□□□ -0.5
PSEN1-210ENST00000554131 C3orf79P0CE67 100 aa11.93□□□□□ -0.5
PSEN1-210ENST00000554131 SNRPEP62304 92 aaKnown RBP11.93□□□□□ -0.5
PSEN1-210ENST00000554131 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
PSEN1-210ENST00000554131 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
PSEN1-210ENST00000554131 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
PSEN1-210ENST00000554131 BIRC6Q9NR09 4857 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 C16orf90A8MZG2 172 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 ZNF561-AS1K7EIQ3 104 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 SPINK8P0C7L1 97 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 PMCHL2Q9BQD1 86 aa11.91□□□□□ -0.5
PSEN1-210ENST00000554131 KRTAP10-1P60331 282 aa11.9□□□□□ -0.5
PSEN1-210ENST00000554131 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
PSEN1-210ENST00000554131 H3BRM9 83 aa11.89□□□□□ -0.51
PSEN1-210ENST00000554131 GCSHP23434 173 aa11.89□□□□□ -0.51
PSEN1-210ENST00000554131 PET117Q6UWS5 81 aa11.89□□□□□ -0.51
PSEN1-210ENST00000554131 Q8IZM0 81 aa11.89□□□□□ -0.51
PSEN1-210ENST00000554131 TMEM223A0PJW6 202 aa11.88□□□□□ -0.51
PSEN1-210ENST00000554131 TMEM170BQ5T4T1 132 aa11.88□□□□□ -0.51
PSEN1-210ENST00000554131 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
PSEN1-210ENST00000554131 Q6ZRU5 148 aa11.88□□□□□ -0.51
PSEN1-210ENST00000554131 APOBP04114 4563 aaKnown RBP11.88□□□□□ -0.51
PSEN1-210ENST00000554131 DPM2O94777 84 aa11.87□□□□□ -0.51
PSEN1-210ENST00000554131 PLNP26678 52 aa11.87□□□□□ -0.51
PSEN1-210ENST00000554131 KRTDAPP60985 99 aa11.87□□□□□ -0.51
PSEN1-210ENST00000554131 SYCNQ0VAF6 134 aa11.87□□□□□ -0.51
PSEN1-210ENST00000554131 F8WDY8 70 aa11.86□□□□□ -0.51
PSEN1-210ENST00000554131 S100A2P29034 98 aa11.86□□□□□ -0.51
PSEN1-210ENST00000554131 C2orf82Q6UX34 121 aa11.86□□□□□ -0.51
PSEN1-210ENST00000554131 CARD19Q96LW7 228 aa11.86□□□□□ -0.51
PSEN1-210ENST00000554131 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms