RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 STOML3Q8TAV4 291 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 TMEM18Q96B42 140 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 GAGE2DQ9UEU5 116 aa3.91□□□□□ -1.78
ATXN3-224ENST00000554040 F2Z2F3 143 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 F8WDY8 70 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 TMEM241Q24JQ0 296 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
ATXN3-224ENST00000554040 SDHAF1A6NFY7 115 aa3.89□□□□□ -1.79
ATXN3-224ENST00000554040 NUPR1O60356 82 aa3.89□□□□□ -1.79
ATXN3-224ENST00000554040 PMCHP20382 165 aa3.89□□□□□ -1.79
ATXN3-224ENST00000554040 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
ATXN3-224ENST00000554040 RPS20P60866 119 aaKnown RBP3.89□□□□□ -1.79
ATXN3-224ENST00000554040 MT1HP80294 61 aa3.89□□□□□ -1.79
ATXN3-224ENST00000554040 MRPL52Q86TS9 123 aaKnown RBP3.89□□□□□ -1.79
ATXN3-224ENST00000554040 RPL39LQ96EH5 51 aaKnown RBP3.89□□□□□ -1.79
ATXN3-224ENST00000554040 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-224ENST00000554040 C5orf52A6NGY3 159 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 I3L3M4 83 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 NDUFA1O15239 70 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 RPL28P46779 137 aaKnown RBP3.88□□□□□ -1.79
ATXN3-224ENST00000554040 LYZL1Q6UWQ5 148 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 UNQ6190/PRO20217Q6UXQ8 127 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 OR10D4PQ8NGN7 298 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 MRAP2Q96G30 205 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 SMDT1Q9H4I9 107 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 C6orf48Q9UBA6 75 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 ALG5Q9Y673 324 aa3.88□□□□□ -1.79
ATXN3-224ENST00000554040 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
ATXN3-224ENST00000554040 TRAV13-1A0A0B4J241 112 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 MAP1LC3B2A6NCE7 125 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 SSNA1O43805 119 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 PRSS2P07478 247 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 DEFA1P59665 94 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 LINC00242Q5T6M2 205 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 TMUB2Q71RG4 321 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 FP248Q71RG6 208 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-224ENST00000554040 C9orf62Q8N4C0 152 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 FAM210AQ96ND0 272 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 MAP1LC3BQ9GZQ8 125 aa3.87□□□□□ -1.79
ATXN3-224ENST00000554040 XKRY2A2RUG3 117 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 IFNA1P01562 189 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 FAM229BQ4G0N7 80 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 C9orf129Q5T035 196 aaKnown RBP3.86□□□□□ -1.79
ATXN3-224ENST00000554040 AKR1C8PQ5T2L2 129 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 RPL7L1Q6DKI1 246 aaKnown RBP3.86□□□□□ -1.79
ATXN3-224ENST00000554040 TEX261Q6UWH6 196 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 ORAOV1Q8WV07 137 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 CYTL1Q9NRR1 136 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
ATXN3-224ENST00000554040 CSDC2Q9Y534 153 aaKnown RBP3.86□□□□□ -1.79
ATXN3-224ENST00000554040 FLGP20930 4061 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-224ENST00000554040 TRBV6-5A0A0K0K1A5 114 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 BCE1O60756 84 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 CTRLP40313 264 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 RPL35P42766 123 aaKnown RBP3.85□□□□□ -1.79
ATXN3-224ENST00000554040 LBHQ53QV2 105 aaPredicted RBP3.85□□□□□ -1.79
ATXN3-224ENST00000554040 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 ENKURQ8TC29 256 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 CNFNQ9BYD5 112 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 TMEM242Q9NWH2 141 aa3.85□□□□□ -1.79
ATXN3-224ENST00000554040 IGKV2D-26A0A0A0MRZ7 120 aa3.84□□□□□ -1.79
ATXN3-224ENST00000554040 BORCS7-ASMTA0A0B4J1R7 106 aa3.84□□□□□ -1.79
ATXN3-224ENST00000554040 C7orf77A4D0Y5 90 aa3.84□□□□□ -1.79
ATXN3-224ENST00000554040 NDUFC2-KCTD14E9PQ53 114 aa3.84□□□□□ -1.79
ATXN3-224ENST00000554040 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
ATXN3-224ENST00000554040 RNASE13Q5GAN3 156 aaKnown RBP3.84□□□□□ -1.79
ATXN3-224ENST00000554040 RNASE7Q9H1E1 156 aaKnown RBP3.84□□□□□ -1.79
ATXN3-224ENST00000554040 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 TRBV30A0A0K0K1B3 111 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 PFDN1O60925 122 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 POLR2KP53803 58 aaKnown RBP3.83□□□□□ -1.8
ATXN3-224ENST00000554040 MARVELD1Q9BSK0 173 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 UBE2D4Q9Y2X8 147 aa3.83□□□□□ -1.8
ATXN3-224ENST00000554040 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 UPK1BO75841 260 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 SMAGPQ0VAQ4 97 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 CENPWQ5EE01 88 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 SPAG11AQ6PDA7 123 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 SMIM15Q7Z3B0 74 aa3.82□□□□□ -1.8
ATXN3-224ENST00000554040 PACRGQ96M98 296 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-224ENST00000554040 MACF1Q9UPN3 7388 aaKnown RBP3.81□□□□□ -1.8
ATXN3-224ENST00000554040 Q6ZUT4 128 aa3.81□□□□□ -1.8
ATXN3-224ENST00000554040 MRPL55Q7Z7F7 128 aaKnown RBP3.81□□□□□ -1.8
ATXN3-224ENST00000554040 KRTAP13-1Q8IUC0 172 aa3.81□□□□□ -1.8
ATXN3-224ENST00000554040 SFT2D1Q8WV19 159 aa3.81□□□□□ -1.8
ATXN3-224ENST00000554040 MBD3L1Q8WWY6 194 aa3.81□□□□□ -1.8
ATXN3-224ENST00000554040 TP73-AS1Q9UF72 201 aa3.81□□□□□ -1.8
ATXN3-224ENST00000554040 A0A1B0GV50 99 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 A0A1B0GVG6 124 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 ZNF727A8MUV8 499 aa3.8□□□□□ -1.8
ATXN3-224ENST00000554040 VCYO14598 125 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms