RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 XCL1P47992 114 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 HERVK_113P61574 105 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 LINC00469Q8N7U9 141 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
SHMT2-210ENST00000553950 IGLV10-54A0A075B6I4 117 aa9.73□□□□□ -0.85
SHMT2-210ENST00000553950 COX7A2LO14548 114 aa9.73□□□□□ -0.85
SHMT2-210ENST00000553950 SCGB1D1O95968 90 aa9.73□□□□□ -0.85
SHMT2-210ENST00000553950 Q6ZR54 194 aa9.73□□□□□ -0.85
SHMT2-210ENST00000553950 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
SHMT2-210ENST00000553950 PSCAO43653 123 aa9.72□□□□□ -0.85
SHMT2-210ENST00000553950 APOMO95445 188 aa9.72□□□□□ -0.85
SHMT2-210ENST00000553950 JOSD1Q15040 202 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-210ENST00000553950 TMEM170BQ5T4T1 132 aa9.72□□□□□ -0.85
SHMT2-210ENST00000553950 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
SHMT2-210ENST00000553950 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.85
SHMT2-210ENST00000553950 A0A087WZ39 114 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 GAGE12HA6NDE8 117 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-210ENST00000553950 MALP21145 153 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 FOXI1Q12951 378 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 DNAH6Q9C0G6 4158 aa9.71□□□□□ -0.86
SHMT2-210ENST00000553950 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
SHMT2-210ENST00000553950 CFAP161Q6P656 301 aa9.7□□□□□ -0.86
SHMT2-210ENST00000553950 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
SHMT2-210ENST00000553950 M0R2N4 97 aa9.69□□□□□ -0.86
SHMT2-210ENST00000553950 C1orf134Q5TEV5 83 aa9.69□□□□□ -0.86
SHMT2-210ENST00000553950 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
SHMT2-210ENST00000553950 IGHV1-58A0A0C4DH39 117 aa9.68□□□□□ -0.86
SHMT2-210ENST00000553950 SMIM6P0DI80 62 aa9.68□□□□□ -0.86
SHMT2-210ENST00000553950 DNAH1Q9P2D7 4330 aa9.67□□□□□ -0.86
SHMT2-210ENST00000553950 LOC105371267A0A1B0GV96 52 aa9.67□□□□□ -0.86
SHMT2-210ENST00000553950 COX6A2Q02221 97 aa9.67□□□□□ -0.86
SHMT2-210ENST00000553950 C14orf177Q52M58 125 aa9.67□□□□□ -0.86
SHMT2-210ENST00000553950 KRTAP26-1Q6PEX3 210 aa9.67□□□□□ -0.86
SHMT2-210ENST00000553950 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
SHMT2-210ENST00000553950 SFTA2Q6UW10 78 aa9.66□□□□□ -0.86
SHMT2-210ENST00000553950 C5orf38Q86SI9 138 aa9.66□□□□□ -0.86
SHMT2-210ENST00000553950 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
SHMT2-210ENST00000553950 PYY3Q5JQD4 70 aa9.65□□□□□ -0.86
SHMT2-210ENST00000553950 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 PRSS2P07478 247 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 CXCL5P42830 114 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
SHMT2-210ENST00000553950 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 PLEKHB2Q96CS7 222 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 VAMP8Q9BV40 100 aa9.64□□□□□ -0.87
SHMT2-210ENST00000553950 IGLV5-39A0A0G2JS06 123 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 E9PLD3 99 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 F8WDY8 70 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 S100A12P80511 92 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 Q8IZM0 81 aa9.63□□□□□ -0.87
SHMT2-210ENST00000553950 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-210ENST00000553950 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
SHMT2-210ENST00000553950 USP17L23D6RBM5 183 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 EREGO14944 169 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 LEPROTO15243 131 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
SHMT2-210ENST00000553950 NMUP48645 174 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 COX7B2Q8TF08 81 aa9.61□□□□□ -0.87
SHMT2-210ENST00000553950 C15orf56Q8N910 161 aa9.6□□□□□ -0.87
SHMT2-210ENST00000553950 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
SHMT2-210ENST00000553950 KMT2AQ03164 3969 aa9.59□□□□□ -0.87
SHMT2-210ENST00000553950 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
SHMT2-210ENST00000553950 STPG4Q8N801 248 aa9.59□□□□□ -0.87
SHMT2-210ENST00000553950 J3QQQ9 107 aa9.58□□□□□ -0.88
SHMT2-210ENST00000553950 CKS1BP61024 79 aa9.58□□□□□ -0.88
SHMT2-210ENST00000553950 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
SHMT2-210ENST00000553950 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
SHMT2-210ENST00000553950 SPATA45Q537H7 98 aa9.57□□□□□ -0.88
SHMT2-210ENST00000553950 LINC00336Q6ZUF6 198 aa9.57□□□□□ -0.88
SHMT2-210ENST00000553950 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
SHMT2-210ENST00000553950 PKIGQ9Y2B9 76 aa9.57□□□□□ -0.88
SHMT2-210ENST00000553950 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
SHMT2-210ENST00000553950 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-210ENST00000553950 MYMXA0A1B0GTQ4 84 aa9.56□□□□□ -0.88
SHMT2-210ENST00000553950 NDUFA1O15239 70 aa9.56□□□□□ -0.88
SHMT2-210ENST00000553950 HERV-K104P63124 156 aa9.56□□□□□ -0.88
SHMT2-210ENST00000553950 HIGD2BQ4VC39 106 aa9.56□□□□□ -0.88
SHMT2-210ENST00000553950 ANKRD39Q53RE8 183 aa9.56□□□□□ -0.88
SHMT2-210ENST00000553950 LRCOL1A6NCL2 159 aa9.55□□□□□ -0.88
SHMT2-210ENST00000553950 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
SHMT2-210ENST00000553950 A0A087WTM6 91 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 LINC00587B1AMM8 73 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 LECT2O14960 151 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 Q8N814 137 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 NTN5Q8WTR8 489 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-210ENST00000553950 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
SHMT2-210ENST00000553950 SACSQ9NZJ4 4579 aa9.53□□□□□ -0.88
SHMT2-210ENST00000553950 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
SHMT2-210ENST00000553950 ZNF815PA8K554 130 aa9.53□□□□□ -0.88
SHMT2-210ENST00000553950 RTL8CO15255 209 aa9.53□□□□□ -0.88
SHMT2-210ENST00000553950 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
SHMT2-210ENST00000553950 CARD19Q96LW7 228 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms