RNA–Protein interactions for RNA: ENST00000553936.5

GPHN-206, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 574 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-206ENST00000553936 TRBV6-5A0A0K0K1A5 114 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 TSHBP01222 138 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 FCER1GP30273 86 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 GNG4P50150 75 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 LBHQ53QV2 105 aaPredicted RBP3.84□□□□□ -1.79
GPHN-206ENST00000553936 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 KCNRGQ8N5I3 272 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 LINC00337Q8N6G1 96 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 LINC00304Q8N9R0 145 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 TMEM18Q96B42 140 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 KRTAP9-3Q9BYQ3 159 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 CYTL1Q9NRR1 136 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 TMEM242Q9NWH2 141 aa3.84□□□□□ -1.79
GPHN-206ENST00000553936 FXYD6-FXYD2A0A087WZ82 144 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 RAB19A4D1S5 217 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 UMAD1C9J7I0 102 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 CCL20P78556 96 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 MBD3L1Q8WWY6 194 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 PACRGQ96M98 296 aaPredicted RBP3.83□□□□□ -1.8
GPHN-206ENST00000553936 CTDSP1Q9GZU7 261 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 MANBALQ9NQG1 85 aa3.83□□□□□ -1.8
GPHN-206ENST00000553936 MUC17Q685J3 4493 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 TRBV27A0A0K0K1C4 114 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 A0A1B0GV50 99 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 NDUFC2-KCTD14E9PQ53 114 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 PPP1R17O96001 155 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 SEC61BP60468 96 aaKnown RBP3.82□□□□□ -1.8
GPHN-206ENST00000553936 FAM213BQ8TBF2 198 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 C11orf52Q96A22 123 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 BORCS7Q96B45 105 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 KIR2DL4Q99706 377 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 C6orf48Q9UBA6 75 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 UBE2D4Q9Y2X8 147 aa3.82□□□□□ -1.8
GPHN-206ENST00000553936 TEX46H3BTG2 121 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 VCYO14598 125 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 BCE1O60756 84 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 GIPP09681 153 aaPredicted RBP3.81□□□□□ -1.8
GPHN-206ENST00000553936 CFC1BP0CG36 223 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 ASB16-AS1Q495Z4 193 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 FAM229BQ4G0N7 80 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
GPHN-206ENST00000553936 UNQ6190/PRO20217Q6UXQ8 127 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 FP248Q71RG6 208 aaPredicted RBP3.81□□□□□ -1.8
GPHN-206ENST00000553936 KRTAP3-1Q9BYR8 98 aa3.81□□□□□ -1.8
GPHN-206ENST00000553936 TGIF2-C20orf24A0A0A6YYL0 155 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 PDE6DO43924 150 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 POLR2KP53803 58 aaKnown RBP3.8□□□□□ -1.8
GPHN-206ENST00000553936 C10orf25Q5T742 122 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 KRTAP7-1Q8IUC3 87 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 TIMM21Q9BVV7 248 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 RNASE7Q9H1E1 156 aaKnown RBP3.8□□□□□ -1.8
GPHN-206ENST00000553936 GNG13Q9P2W3 67 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
GPHN-206ENST00000553936 IGHV3OR16-9A0A0B4J2B5 98 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 A0A1B0GVG6 124 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 PPP1R2P9O14990 202 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 TCAPO15273 167 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 ARPC5O15511 151 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 UBE2AP49459 152 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 FOXA3P55318 350 aaPredicted RBP3.79□□□□□ -1.8
GPHN-206ENST00000553936 IFITM3Q01628 133 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 Q5BKY6 102 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 C9orf129Q5T035 196 aaKnown RBP3.79□□□□□ -1.8
GPHN-206ENST00000553936 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 Q6ZUT4 128 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 MRPL55Q7Z7F7 128 aaKnown RBP3.79□□□□□ -1.8
GPHN-206ENST00000553936 MED9Q9NWA0 146 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 TP73-AS1Q9UF72 201 aa3.79□□□□□ -1.8
GPHN-206ENST00000553936 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
GPHN-206ENST00000553936 PRSS2P07478 247 aa3.78□□□□□ -1.8
GPHN-206ENST00000553936 HBBP68871 147 aa3.78□□□□□ -1.8
GPHN-206ENST00000553936 KRTAP13-2Q52LG2 175 aa3.78□□□□□ -1.8
GPHN-206ENST00000553936 TRBV20OR9-2A0A075B6H5 130 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 IFITM10A6NMD0 228 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 A8MWL6 223 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 CKS1BP61024 79 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 SUMO2P61956 95 aaKnown RBP3.77□□□□□ -1.81
GPHN-206ENST00000553936 TMEM191AQ9H0A3 160 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 SPANXA1Q9NS26 97 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 ANAPC11Q9NYG5 84 aa3.77□□□□□ -1.81
GPHN-206ENST00000553936 GATCO43716 136 aaKnown RBP3.76□□□□□ -1.81
GPHN-206ENST00000553936 RAB4AP20338 218 aa3.76□□□□□ -1.81
GPHN-206ENST00000553936 MRPS36P82909 103 aaKnown RBP3.76□□□□□ -1.81
GPHN-206ENST00000553936 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
GPHN-206ENST00000553936 NDUFA12Q9UI09 145 aa3.76□□□□□ -1.81
GPHN-206ENST00000553936 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 KANTRA0A1W2PQU2 76 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 TAGLN2P37802 199 aaKnown RBP3.75□□□□□ -1.81
GPHN-206ENST00000553936 ZNF345Q14585 488 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 KIAA0087Q14695 138 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 C2orf82Q6UX34 121 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 AMN1Q8IY45 258 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 LINC00469Q8N7U9 141 aa3.75□□□□□ -1.81
GPHN-206ENST00000553936 XAGE1AQ9HD64 81 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms