RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C10orf91Q5T1B1 145 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 NXT2Q9NPJ8 142 aaKnown RBP5.48□□□□□ -1.53
PSEN1-209ENST00000553855 CDC42SE2Q9NRR3 84 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 SPANXA1Q9NS26 97 aa5.48□□□□□ -1.53
PSEN1-209ENST00000553855 CSDC2Q9Y534 153 aaKnown RBP5.48□□□□□ -1.53
PSEN1-209ENST00000553855 LINC00959A0A1B0GUT2 108 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 K7EMI3 77 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 VPREB1P12018 145 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 XCL1P47992 114 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 Q8N1X5 172 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 Q8N8P6 123 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 GNB1LQ9BYB4 327 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
PSEN1-209ENST00000553855 TRAV13-1A0A0B4J241 112 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 KRTAP10-1P60331 282 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 Q6ZN92 141 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 PRSS3P2Q8NHM4 247 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 CYSLTR1Q9Y271 337 aa5.46□□□□□ -1.54
PSEN1-209ENST00000553855 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 APOMO95445 188 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 PRSS1P07477 247 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 KIAA1644Q3SXP7 199 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 PAPPA-AS1Q5QFB9 102 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 CD164L2Q6UWJ8 174 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 C2orf88Q9BSF0 95 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 SMCO4Q9NRQ5 59 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 PKIGQ9Y2B9 76 aa5.45□□□□□ -1.54
PSEN1-209ENST00000553855 DNAH5Q8TE73 4624 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 LINC01549A6NIU2 74 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 IFITM10A6NMD0 228 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 COX7A2LO14548 114 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 RPL39P62891 51 aaKnown RBP5.44□□□□□ -1.54
PSEN1-209ENST00000553855 MRPS36P82909 103 aaKnown RBP5.44□□□□□ -1.54
PSEN1-209ENST00000553855 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
PSEN1-209ENST00000553855 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 C2orf66Q6UXQ4 117 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 Q6ZUT4 128 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 FA2HQ7L5A8 372 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 DPH3Q96FX2 82 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 TRAPPC1Q9Y5R8 145 aa5.44□□□□□ -1.54
PSEN1-209ENST00000553855 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 HIGD2BQ4VC39 106 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 TEX43Q6ZNM6 134 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 C9orf163Q8N9P6 203 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 TMEM141Q96I45 108 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 VCX2Q9H322 139 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 PYGO1Q9Y3Y4 419 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 HERC1Q15751 4861 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
PSEN1-209ENST00000553855 TGIF2-C20orf24A0A0A6YYL0 155 aa5.42□□□□□ -1.54
PSEN1-209ENST00000553855 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
PSEN1-209ENST00000553855 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
PSEN1-209ENST00000553855 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
PSEN1-209ENST00000553855 PKHD1P08F94 4074 aa5.42□□□□□ -1.54
PSEN1-209ENST00000553855 GVQW2A0A096LPI5 108 aaPredicted RBP5.41□□□□□ -1.54
PSEN1-209ENST00000553855 XGP55808 180 aa5.41□□□□□ -1.54
PSEN1-209ENST00000553855 RAB5BP61020 215 aa5.41□□□□□ -1.54
PSEN1-209ENST00000553855 SEC11AP67812 179 aa5.41□□□□□ -1.54
PSEN1-209ENST00000553855 C15orf56Q8N910 161 aa5.41□□□□□ -1.54
PSEN1-209ENST00000553855 ALKBH7Q9BT30 221 aaPredicted RBP5.41□□□□□ -1.54
PSEN1-209ENST00000553855 PAM16Q9Y3D7 125 aa5.41□□□□□ -1.54
PSEN1-209ENST00000553855 IGLV4-3A0A075B6K6 122 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 C10orf25Q5T742 122 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 C5orf38Q86SI9 138 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 MPLKIPQ8TAP9 179 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 SCGB3A1Q96QR1 104 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
PSEN1-209ENST00000553855 SMR3BP02814 79 aaPredicted RBP5.39□□□□□ -1.55
PSEN1-209ENST00000553855 HAMPP81172 84 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 SYCNQ0VAF6 134 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 ERASQ7Z444 233 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 OR10D4PQ8NGN7 298 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 TOMM6Q96B49 74 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 CAMK2N2Q96S95 79 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 TIMM17AQ99595 171 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
PSEN1-209ENST00000553855 CHAC1Q9BUX1 264 aa5.39□□□□□ -1.55
PSEN1-209ENST00000553855 SPAG11BQ08648 103 aa5.38□□□□□ -1.55
PSEN1-209ENST00000553855 Q6ZSA8 131 aa5.38□□□□□ -1.55
PSEN1-209ENST00000553855 ORAOV1Q8WV07 137 aa5.38□□□□□ -1.55
PSEN1-209ENST00000553855 C2orf48Q96LS8 159 aa5.38□□□□□ -1.55
PSEN1-209ENST00000553855 PACRGQ96M98 296 aaPredicted RBP5.38□□□□□ -1.55
PSEN1-209ENST00000553855 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
PSEN1-209ENST00000553855 LINC00474Q9P2X8 69 aa5.38□□□□□ -1.55
PSEN1-209ENST00000553855 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 F8WDY8 70 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
PSEN1-209ENST00000553855 PRSS2P07478 247 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 LINC00614P0C842 121 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 SNRPEP62304 92 aaKnown RBP5.37□□□□□ -1.55
PSEN1-209ENST00000553855 HERVK_113P63121 156 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 Q5VSD8 79 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 SCXQ7RTU7 201 aa5.37□□□□□ -1.55
PSEN1-209ENST00000553855 APOBP04114 4563 aaKnown RBP5.36□□□□□ -1.55
PSEN1-209ENST00000553855 IGHV3OR16-9A0A0B4J2B5 98 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms