RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
TUBB3-202ENST00000553656 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
TUBB3-202ENST00000553656 SERF1AO75920 110 aa9.05□□□□□ -0.96
TUBB3-202ENST00000553656 NDUFA6P56556 154 aa9.05□□□□□ -0.96
TUBB3-202ENST00000553656 PMVKQ15126 192 aa9.05□□□□□ -0.96
TUBB3-202ENST00000553656 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
TUBB3-202ENST00000553656 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
TUBB3-202ENST00000553656 DNAH11Q96DT5 4516 aa9.04□□□□□ -0.96
TUBB3-202ENST00000553656 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
TUBB3-202ENST00000553656 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
TUBB3-202ENST00000553656 ZNF561-AS1K7EIQ3 104 aa9.04□□□□□ -0.96
TUBB3-202ENST00000553656 HERVK_113P63121 156 aa9.04□□□□□ -0.96
TUBB3-202ENST00000553656 CST9LQ9H4G1 147 aa9.04□□□□□ -0.96
TUBB3-202ENST00000553656 HIST1H2BKO60814 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BJP06899 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BOP23527 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BBP33778 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BDP58876 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BCP62807 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 COX6A2Q02221 97 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST2H2BEQ16778 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.02□□□□□ -0.97
TUBB3-202ENST00000553656 FAM19A2Q8N3H0 131 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BHQ93079 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BNQ99877 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 HIST1H2BMQ99879 126 aa9.02□□□□□ -0.97
TUBB3-202ENST00000553656 A0A087WZ39 114 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 KRTAP10-1P60331 282 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 SPAG11BQ08648 103 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 FAM19A3Q7Z5A8 133 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 OR10D4PQ8NGN7 298 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 ORAOV1Q8WV07 137 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
TUBB3-202ENST00000553656 PKHD1P08F94 4074 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 IGHV3-64A0A075B6Q5 118 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 LEPROTL1O95214 131 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 LINC00469Q8N7U9 141 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 HSPB8Q9UJY1 196 aa9□□□□□ -0.97
TUBB3-202ENST00000553656 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
TUBB3-202ENST00000553656 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
TUBB3-202ENST00000553656 LINC00310P59036 64 aa8.99□□□□□ -0.97
TUBB3-202ENST00000553656 LINC01620Q4KN68 170 aa8.99□□□□□ -0.97
TUBB3-202ENST00000553656 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
TUBB3-202ENST00000553656 LINC00526Q96FQ7 95 aa8.99□□□□□ -0.97
TUBB3-202ENST00000553656 SYCNQ0VAF6 134 aa8.98□□□□□ -0.97
TUBB3-202ENST00000553656 CARD19Q96LW7 228 aa8.98□□□□□ -0.97
TUBB3-202ENST00000553656 CAMK2N2Q96S95 79 aa8.98□□□□□ -0.97
TUBB3-202ENST00000553656 CHAC1Q9BUX1 264 aa8.98□□□□□ -0.97
TUBB3-202ENST00000553656 CDKN2A-AS1Q9UH64 79 aa8.98□□□□□ -0.97
TUBB3-202ENST00000553656 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 H3BRM9 83 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 NUPR1O60356 82 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 SLPIP03973 132 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 PRSS2P07478 247 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 FABP4P15090 132 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 C2orf48Q96LS8 159 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
TUBB3-202ENST00000553656 CDK2AP2O75956 126 aa8.96□□□□□ -0.98
TUBB3-202ENST00000553656 IGLC3P0DOY3 106 aa8.96□□□□□ -0.98
TUBB3-202ENST00000553656 CHTOPQ9Y3Y2 248 aaKnown RBP8.96□□□□□ -0.98
TUBB3-202ENST00000553656 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 F8WDY8 70 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 H0Y8G0 127 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 NDUFA1O15239 70 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 TOMM7Q9P0U1 55 aa8.95□□□□□ -0.98
TUBB3-202ENST00000553656 DNAH5Q8TE73 4624 aa8.94□□□□□ -0.98
TUBB3-202ENST00000553656 F8VRH5 84 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 CKS1BP61024 79 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 COA6Q5JTJ3 125 aaKnown RBP8.93□□□□□ -0.98
TUBB3-202ENST00000553656 TMEM170BQ5T4T1 132 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 Q6ZRU5 148 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
TUBB3-202ENST00000553656 LRP1BQ9NZR2 4599 aa8.92□□□□□ -0.98
TUBB3-202ENST00000553656 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
TUBB3-202ENST00000553656 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
TUBB3-202ENST00000553656 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
TUBB3-202ENST00000553656 Q8IZM0 81 aa8.92□□□□□ -0.98
TUBB3-202ENST00000553656 MRPL35Q9NZE8 188 aaKnown RBP8.92□□□□□ -0.98
TUBB3-202ENST00000553656 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
TUBB3-202ENST00000553656 ZNF22P17026 224 aaPredicted RBP8.91□□□□□ -0.98
TUBB3-202ENST00000553656 Q6ZSA8 131 aa8.91□□□□□ -0.98
TUBB3-202ENST00000553656 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
TUBB3-202ENST00000553656 CXCL5P42830 114 aa8.9□□□□□ -0.98
TUBB3-202ENST00000553656 KIAA0087Q14695 138 aa8.9□□□□□ -0.98
TUBB3-202ENST00000553656 RNF151Q2KHN1 245 aa8.9□□□□□ -0.98
TUBB3-202ENST00000553656 DPH3Q96FX2 82 aa8.9□□□□□ -0.98
TUBB3-202ENST00000553656 TMA7Q9Y2S6 64 aaKnown RBP8.9□□□□□ -0.98
TUBB3-202ENST00000553656 LOC107984640A0A0U1RRK4 108 aa8.89□□□□□ -0.99
TUBB3-202ENST00000553656 HAMPP81172 84 aa8.89□□□□□ -0.99
TUBB3-202ENST00000553656 ODF1Q14990 250 aa8.89□□□□□ -0.99
TUBB3-202ENST00000553656 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
TUBB3-202ENST00000553656 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
TUBB3-202ENST00000553656 COX7B2Q8TF08 81 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms