RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 FCER1GP30273 86 aa8.43□□□□□ -1.06
NEDD1-205ENST00000553609 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
NEDD1-205ENST00000553609 ORAOV1Q8WV07 137 aa8.43□□□□□ -1.06
NEDD1-205ENST00000553609 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
NEDD1-205ENST00000553609 NDUFA1O15239 70 aa8.42□□□□□ -1.06
NEDD1-205ENST00000553609 UBE2D1P51668 147 aa8.42□□□□□ -1.06
NEDD1-205ENST00000553609 SUMO2P61956 95 aaKnown RBP8.42□□□□□ -1.06
NEDD1-205ENST00000553609 A6NJY4 79 aa8.41□□□□□ -1.06
NEDD1-205ENST00000553609 TMEM250H0YL14 139 aa8.41□□□□□ -1.06
NEDD1-205ENST00000553609 M0QXV9 152 aa8.41□□□□□ -1.06
NEDD1-205ENST00000553609 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
NEDD1-205ENST00000553609 CARHSP1Q9Y2V2 147 aaKnown RBP8.41□□□□□ -1.06
NEDD1-205ENST00000553609 KIAA0087Q14695 138 aa8.4□□□□□ -1.06
NEDD1-205ENST00000553609 GAGE2EQ4V326 116 aa8.4□□□□□ -1.06
NEDD1-205ENST00000553609 BORCS7Q96B45 105 aa8.4□□□□□ -1.06
NEDD1-205ENST00000553609 GAGE2DQ9UEU5 116 aa8.4□□□□□ -1.06
NEDD1-205ENST00000553609 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
NEDD1-205ENST00000553609 TMEM241Q24JQ0 296 aa8.39□□□□□ -1.07
NEDD1-205ENST00000553609 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
NEDD1-205ENST00000553609 UBE2BP63146 152 aa8.38□□□□□ -1.07
NEDD1-205ENST00000553609 C9orf129Q5T035 196 aaKnown RBP8.38□□□□□ -1.07
NEDD1-205ENST00000553609 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
NEDD1-205ENST00000553609 PPP1R17O96001 155 aa8.37□□□□□ -1.07
NEDD1-205ENST00000553609 LINC01551Q86U37 167 aa8.37□□□□□ -1.07
NEDD1-205ENST00000553609 PPP1R2P9O14990 202 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 ZNF861PO60384 105 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 TSPAN13O95857 204 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
NEDD1-205ENST00000553609 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
NEDD1-205ENST00000553609 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
NEDD1-205ENST00000553609 SLC51BQ86UW2 128 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 TMEM18Q96B42 140 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
NEDD1-205ENST00000553609 A0A087X002 238 aa8.35□□□□□ -1.07
NEDD1-205ENST00000553609 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
NEDD1-205ENST00000553609 V9GYV3 84 aa8.35□□□□□ -1.07
NEDD1-205ENST00000553609 TRBV24-1A0A075B6N3 115 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 RIGQ13278 110 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 FAM104BQ5XKR9 115 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 C2orf82Q6UX34 121 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
NEDD1-205ENST00000553609 IFITM10A6NMD0 228 aa8.33□□□□□ -1.08
NEDD1-205ENST00000553609 CEBPGP53567 150 aa8.33□□□□□ -1.08
NEDD1-205ENST00000553609 HBBP68871 147 aa8.33□□□□□ -1.08
NEDD1-205ENST00000553609 SMIM7Q9BQ49 75 aa8.33□□□□□ -1.08
NEDD1-205ENST00000553609 SMIM2Q9BVW6 85 aa8.32□□□□□ -1.08
NEDD1-205ENST00000553609 LINC00862A6NCI5 91 aa8.31□□□□□ -1.08
NEDD1-205ENST00000553609 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
NEDD1-205ENST00000553609 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 TCAPO15273 167 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 NUPR1O60356 82 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 TNFRSF6BO95407 300 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 TCTE3Q8IZS6 198 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 C22orf24Q9Y442 160 aa8.3□□□□□ -1.08
NEDD1-205ENST00000553609 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
NEDD1-205ENST00000553609 IGLV4-3A0A075B6K6 122 aa8.28□□□□□ -1.08
NEDD1-205ENST00000553609 CKS2P33552 79 aa8.28□□□□□ -1.08
NEDD1-205ENST00000553609 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
NEDD1-205ENST00000553609 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
NEDD1-205ENST00000553609 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 NPYP01303 97 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 KRTAP13-2Q52LG2 175 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 ALKAL2Q6UX46 152 aa8.27□□□□□ -1.09
NEDD1-205ENST00000553609 D6R8Y8 96 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 SRP19P09132 144 aaKnown RBP8.26□□□□□ -1.09
NEDD1-205ENST00000553609 CRYGAP11844 174 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 LINC00469Q8N7U9 141 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
NEDD1-205ENST00000553609 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
NEDD1-205ENST00000553609 TPRXLQ17RH7 258 aa8.25□□□□□ -1.09
NEDD1-205ENST00000553609 XAGE1AQ9HD64 81 aa8.25□□□□□ -1.09
NEDD1-205ENST00000553609 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
NEDD1-205ENST00000553609 BCE1O60756 84 aa8.24□□□□□ -1.09
NEDD1-205ENST00000553609 IFI27P40305 119 aaPredicted RBP8.24□□□□□ -1.09
NEDD1-205ENST00000553609 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
NEDD1-205ENST00000553609 RPL23P62829 140 aaKnown RBP8.24□□□□□ -1.09
NEDD1-205ENST00000553609 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
NEDD1-205ENST00000553609 EIF5A2Q9GZV4 153 aaKnown RBP8.24□□□□□ -1.09
NEDD1-205ENST00000553609 TP73-AS1Q9UF72 201 aa8.24□□□□□ -1.09
NEDD1-205ENST00000553609 A0A1B0GW15 77 aa8.23□□□□□ -1.09
NEDD1-205ENST00000553609 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
NEDD1-205ENST00000553609 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
NEDD1-205ENST00000553609 ZC2HC1BQ5TFG8 222 aa8.23□□□□□ -1.09
NEDD1-205ENST00000553609 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
NEDD1-205ENST00000553609 KRTAP13-1Q8IUC0 172 aa8.22□□□□□ -1.09
NEDD1-205ENST00000553609 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
NEDD1-205ENST00000553609 CDIP1Q9H305 208 aa8.21□□□□□ -1.1
NEDD1-205ENST00000553609 PPBPP02775 128 aa8.2□□□□□ -1.1
NEDD1-205ENST00000553609 MRPL54Q6P161 138 aaKnown RBP8.2□□□□□ -1.1
NEDD1-205ENST00000553609 TEX43Q6ZNM6 134 aa8.2□□□□□ -1.1
NEDD1-205ENST00000553609 Q8IZM0 81 aa8.2□□□□□ -1.1
NEDD1-205ENST00000553609 AMELXQ99217 191 aa8.2□□□□□ -1.1
NEDD1-205ENST00000553609 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms