RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 Q8N8P6 123 aa7.49□□□□□ -1.21
SRP54-203ENST00000553544 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
SRP54-203ENST00000553544 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.48□□□□□ -1.21
SRP54-203ENST00000553544 LINC01600Q96MT4 127 aa7.48□□□□□ -1.21
SRP54-203ENST00000553544 UBE2D4Q9Y2X8 147 aa7.48□□□□□ -1.21
SRP54-203ENST00000553544 IGHV3-64A0A075B6Q5 118 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 GVQW2A0A096LPI5 108 aaPredicted RBP7.47□□□□□ -1.21
SRP54-203ENST00000553544 LOC389332A0A1B0GUA5 103 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 C1orf196B1AJZ1 125 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 NPSP0C0P6 89 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 Q6ZN92 141 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
SRP54-203ENST00000553544 XCL1P47992 114 aa7.46□□□□□ -1.22
SRP54-203ENST00000553544 MRPS36P82909 103 aaKnown RBP7.46□□□□□ -1.22
SRP54-203ENST00000553544 FABP9Q0Z7S8 132 aa7.46□□□□□ -1.22
SRP54-203ENST00000553544 PAPPA-AS1Q5QFB9 102 aa7.46□□□□□ -1.22
SRP54-203ENST00000553544 MRPL18Q9H0U6 180 aaKnown RBP7.46□□□□□ -1.22
SRP54-203ENST00000553544 PKIGQ9Y2B9 76 aa7.46□□□□□ -1.22
SRP54-203ENST00000553544 A0A087WYN8 130 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 HIGD2BQ4VC39 106 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 CD164L2Q6UWJ8 174 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 PRSS3P2Q8NHM4 247 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 C2orf88Q9BSF0 95 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 SMCO4Q9NRQ5 59 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 PYGO1Q9Y3Y4 419 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 TRAPPC1Q9Y5R8 145 aa7.45□□□□□ -1.22
SRP54-203ENST00000553544 CHTF8P0CG12 524 aa7.44□□□□□ -1.22
SRP54-203ENST00000553544 C4orf48Q5BLP8 95 aa7.44□□□□□ -1.22
SRP54-203ENST00000553544 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
SRP54-203ENST00000553544 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
SRP54-203ENST00000553544 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 APOMO95445 188 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 MALP21145 153 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 RAB5BP61020 215 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 RPL39P62891 51 aaKnown RBP7.43□□□□□ -1.22
SRP54-203ENST00000553544 COX6A2Q02221 97 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 KIAA1644Q3SXP7 199 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 Q6ZUT4 128 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
SRP54-203ENST00000553544 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 TRAV13-1A0A0B4J241 112 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 TEX43Q6ZNM6 134 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 ALKBH7Q9BT30 221 aaPredicted RBP7.42□□□□□ -1.22
SRP54-203ENST00000553544 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
SRP54-203ENST00000553544 A0A0J9YXV3 536 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 COX7A2LO14548 114 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 KRTAP10-8P60410 259 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 SEC11AP67812 179 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 ODF1Q14990 250 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 RNASE13Q5GAN3 156 aaKnown RBP7.41□□□□□ -1.22
SRP54-203ENST00000553544 LINC00526Q96FQ7 95 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 TIMM17AQ99595 171 aa7.41□□□□□ -1.22
SRP54-203ENST00000553544 ZNF561-AS1K7EIQ3 104 aa7.4□□□□□ -1.22
SRP54-203ENST00000553544 IGLV4-3A0A075B6K6 122 aa7.39□□□□□ -1.23
SRP54-203ENST00000553544 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
SRP54-203ENST00000553544 SLC7A5P1Q8MH63 180 aa7.39□□□□□ -1.23
SRP54-203ENST00000553544 TOMM6Q96B49 74 aa7.39□□□□□ -1.23
SRP54-203ENST00000553544 VCX2Q9H322 139 aa7.39□□□□□ -1.23
SRP54-203ENST00000553544 A0A096LNI7 61 aa7.38□□□□□ -1.23
SRP54-203ENST00000553544 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
SRP54-203ENST00000553544 SPINK6Q6UWN8 80 aa7.38□□□□□ -1.23
SRP54-203ENST00000553544 ERASQ7Z444 233 aa7.38□□□□□ -1.23
SRP54-203ENST00000553544 CARD19Q96LW7 228 aa7.38□□□□□ -1.23
SRP54-203ENST00000553544 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 F8WDY8 70 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 OR10D4PQ8NGN7 298 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
SRP54-203ENST00000553544 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
SRP54-203ENST00000553544 IGLV4-69A0A075B6H9 119 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 IGHV3OR16-9A0A0B4J2B5 98 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 LINC00614P0C842 121 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
SRP54-203ENST00000553544 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
SRP54-203ENST00000553544 C5orf38Q86SI9 138 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 STPG4Q8N801 248 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 C18orf32Q8TCD1 76 aa7.36□□□□□ -1.23
SRP54-203ENST00000553544 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 HBDP02042 147 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 HERVK_113P63121 156 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 LINC01561Q8N1V8 128 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 YPEL4Q96NS1 127 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 AMELXQ99217 191 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 LINC00474Q9P2X8 69 aa7.35□□□□□ -1.23
SRP54-203ENST00000553544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.34□□□□□ -1.23
SRP54-203ENST00000553544 UBE2D1P51668 147 aa7.34□□□□□ -1.23
SRP54-203ENST00000553544 CHCHD1Q96BP2 118 aaKnown RBP7.34□□□□□ -1.23
SRP54-203ENST00000553544 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
SRP54-203ENST00000553544 ATP5LO75964 103 aa7.33□□□□□ -1.24
SRP54-203ENST00000553544 SPAG11BQ08648 103 aa7.33□□□□□ -1.24
SRP54-203ENST00000553544 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
SRP54-203ENST00000553544 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
SRP54-203ENST00000553544 CAMK2N2Q96S95 79 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms