RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 TMEM241Q24JQ0 296 aa9.73□□□□□ -0.85
RAB5C-209ENST00000552162 LCE2AQ5TA79 106 aaPredicted RBP9.73□□□□□ -0.85
RAB5C-209ENST00000552162 TMEM18Q96B42 140 aa9.73□□□□□ -0.85
RAB5C-209ENST00000552162 IGHV3OR16-9A0A0B4J2B5 98 aa9.72□□□□□ -0.85
RAB5C-209ENST00000552162 CARHSP1Q9Y2V2 147 aaKnown RBP9.72□□□□□ -0.85
RAB5C-209ENST00000552162 PPP1R2P9O14990 202 aa9.71□□□□□ -0.86
RAB5C-209ENST00000552162 CEBPGP53567 150 aa9.71□□□□□ -0.86
RAB5C-209ENST00000552162 KRTAP9-6A0A140TA67 174 aa9.7□□□□□ -0.86
RAB5C-209ENST00000552162 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
RAB5C-209ENST00000552162 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
RAB5C-209ENST00000552162 TSPAN13O95857 204 aa9.69□□□□□ -0.86
RAB5C-209ENST00000552162 SLC51BQ86UW2 128 aa9.69□□□□□ -0.86
RAB5C-209ENST00000552162 RIGQ13278 110 aa9.68□□□□□ -0.86
RAB5C-209ENST00000552162 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
RAB5C-209ENST00000552162 IFITM10A6NMD0 228 aa9.67□□□□□ -0.86
RAB5C-209ENST00000552162 HBBP68871 147 aa9.67□□□□□ -0.86
RAB5C-209ENST00000552162 SPANXA1Q9NS26 97 aa9.67□□□□□ -0.86
RAB5C-209ENST00000552162 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 ZNF861PO60384 105 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
RAB5C-209ENST00000552162 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 MRPL51Q4U2R6 128 aaKnown RBP9.66□□□□□ -0.86
RAB5C-209ENST00000552162 C9orf129Q5T035 196 aaKnown RBP9.66□□□□□ -0.86
RAB5C-209ENST00000552162 SMIM7Q9BQ49 75 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 OSTCQ9NRP0 149 aa9.66□□□□□ -0.86
RAB5C-209ENST00000552162 TRBV30A0A0K0K1B3 111 aa9.65□□□□□ -0.86
RAB5C-209ENST00000552162 NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.86
RAB5C-209ENST00000552162 TCAPO15273 167 aa9.65□□□□□ -0.86
RAB5C-209ENST00000552162 RPL32P62910 135 aaKnown RBP9.64□□□□□ -0.87
RAB5C-209ENST00000552162 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
RAB5C-209ENST00000552162 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
RAB5C-209ENST00000552162 V9GYV3 84 aa9.64□□□□□ -0.87
RAB5C-209ENST00000552162 TRBV24-1A0A075B6N3 115 aa9.63□□□□□ -0.87
RAB5C-209ENST00000552162 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
RAB5C-209ENST00000552162 A0A087X002 238 aa9.62□□□□□ -0.87
RAB5C-209ENST00000552162 NUPR1O60356 82 aa9.62□□□□□ -0.87
RAB5C-209ENST00000552162 PACRGQ96M98 296 aaPredicted RBP9.62□□□□□ -0.87
RAB5C-209ENST00000552162 SMIM2Q9BVW6 85 aa9.62□□□□□ -0.87
RAB5C-209ENST00000552162 NAT8BQ9UHF3 227 aa9.62□□□□□ -0.87
RAB5C-209ENST00000552162 ZNF727A8MUV8 499 aa9.61□□□□□ -0.87
RAB5C-209ENST00000552162 TNFRSF6BO95407 300 aa9.61□□□□□ -0.87
RAB5C-209ENST00000552162 CKS2P33552 79 aa9.61□□□□□ -0.87
RAB5C-209ENST00000552162 BLOC1S1P78537 153 aa9.61□□□□□ -0.87
RAB5C-209ENST00000552162 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
RAB5C-209ENST00000552162 ALKAL2Q6UX46 152 aa9.59□□□□□ -0.87
RAB5C-209ENST00000552162 TCTE3Q8IZS6 198 aa9.59□□□□□ -0.87
RAB5C-209ENST00000552162 TYMSOSQ8TAI1 123 aa9.59□□□□□ -0.87
RAB5C-209ENST00000552162 CTDSP1Q9GZU7 261 aa9.59□□□□□ -0.87
RAB5C-209ENST00000552162 EIF5A2Q9GZV4 153 aaKnown RBP9.59□□□□□ -0.87
RAB5C-209ENST00000552162 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
RAB5C-209ENST00000552162 C22orf24Q9Y442 160 aa9.58□□□□□ -0.88
RAB5C-209ENST00000552162 D6R8Y8 96 aa9.57□□□□□ -0.88
RAB5C-209ENST00000552162 NPYP01303 97 aa9.57□□□□□ -0.88
RAB5C-209ENST00000552162 CRYGAP11844 174 aa9.57□□□□□ -0.88
RAB5C-209ENST00000552162 FAM74A3Q4VXF1 159 aa9.57□□□□□ -0.88
RAB5C-209ENST00000552162 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
RAB5C-209ENST00000552162 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
RAB5C-209ENST00000552162 RPL28P46779 137 aaKnown RBP9.56□□□□□ -0.88
RAB5C-209ENST00000552162 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
RAB5C-209ENST00000552162 A0A1B0GW15 77 aa9.55□□□□□ -0.88
RAB5C-209ENST00000552162 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
RAB5C-209ENST00000552162 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
RAB5C-209ENST00000552162 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
RAB5C-209ENST00000552162 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
RAB5C-209ENST00000552162 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
RAB5C-209ENST00000552162 SMIM27A0A1W2PRY6 76 aa9.54□□□□□ -0.88
RAB5C-209ENST00000552162 PRSS2P07478 247 aa9.54□□□□□ -0.88
RAB5C-209ENST00000552162 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
RAB5C-209ENST00000552162 MUC17Q685J3 4493 aa9.54□□□□□ -0.88
RAB5C-209ENST00000552162 BCE1O60756 84 aa9.53□□□□□ -0.88
RAB5C-209ENST00000552162 RAB5AP20339 215 aa9.53□□□□□ -0.88
RAB5C-209ENST00000552162 CKS1BP61024 79 aa9.53□□□□□ -0.88
RAB5C-209ENST00000552162 TEX43Q6ZNM6 134 aa9.53□□□□□ -0.88
RAB5C-209ENST00000552162 MRPL55Q7Z7F7 128 aaKnown RBP9.53□□□□□ -0.88
RAB5C-209ENST00000552162 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
RAB5C-209ENST00000552162 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
RAB5C-209ENST00000552162 CDIP1Q9H305 208 aa9.52□□□□□ -0.89
RAB5C-209ENST00000552162 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
RAB5C-209ENST00000552162 TP73-AS1Q9UF72 201 aa9.52□□□□□ -0.89
RAB5C-209ENST00000552162 F8W036 122 aa9.51□□□□□ -0.89
RAB5C-209ENST00000552162 PPBPP02775 128 aa9.51□□□□□ -0.89
RAB5C-209ENST00000552162 ADIRFQ15847 76 aa9.51□□□□□ -0.89
RAB5C-209ENST00000552162 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
RAB5C-209ENST00000552162 MRPL54Q6P161 138 aaKnown RBP9.51□□□□□ -0.89
RAB5C-209ENST00000552162 C2orf88Q9BSF0 95 aa9.51□□□□□ -0.89
RAB5C-209ENST00000552162 S100A8P05109 93 aa9.5□□□□□ -0.89
RAB5C-209ENST00000552162 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
RAB5C-209ENST00000552162 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
RAB5C-209ENST00000552162 Q6ZN92 141 aa9.5□□□□□ -0.89
RAB5C-209ENST00000552162 Q8IZM0 81 aa9.5□□□□□ -0.89
RAB5C-209ENST00000552162 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
RAB5C-209ENST00000552162 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
RAB5C-209ENST00000552162 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
RAB5C-209ENST00000552162 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
RAB5C-209ENST00000552162 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
RAB5C-209ENST00000552162 ALKBH7Q9BT30 221 aaPredicted RBP9.48□□□□□ -0.89
RAB5C-209ENST00000552162 RPL37AP8A6NKH3 93 aa9.47□□□□□ -0.89
RAB5C-209ENST00000552162 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
RAB5C-209ENST00000552162 NAT8Q9UHE5 227 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms