RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 IFITM10A6NMD0 228 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 LINC00614P0C842 121 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 RAB5BP61020 215 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 TEX43Q6ZNM6 134 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
PTCH1-225ENST00000551845 IGLV4-3A0A075B6K6 122 aa6.91□□□□□ -1.3
PTCH1-225ENST00000551845 COX7A2LO14548 114 aa6.91□□□□□ -1.3
PTCH1-225ENST00000551845 C18orf32Q8TCD1 76 aa6.91□□□□□ -1.3
PTCH1-225ENST00000551845 SCGB3A1Q96QR1 104 aa6.91□□□□□ -1.3
PTCH1-225ENST00000551845 C2orf88Q9BSF0 95 aa6.91□□□□□ -1.3
PTCH1-225ENST00000551845 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 APOMO95445 188 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 CNBPP62633 177 aaKnown RBP6.9□□□□□ -1.3
PTCH1-225ENST00000551845 HIGD2BQ4VC39 106 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 ERASQ7Z444 233 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 C5orf38Q86SI9 138 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 C9orf163Q8N9P6 203 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 TIMM17AQ99595 171 aa6.9□□□□□ -1.3
PTCH1-225ENST00000551845 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
PTCH1-225ENST00000551845 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
PTCH1-225ENST00000551845 AMELXQ99217 191 aa6.89□□□□□ -1.31
PTCH1-225ENST00000551845 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
PTCH1-225ENST00000551845 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 COLCA2A8K830 154 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 FAM229AH3BQW9 127 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 SLPIP03973 132 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 TRGC2P03986 189 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 XGP55808 180 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 SEC11AP67812 179 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 LINC00242Q5T6M2 205 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
PTCH1-225ENST00000551845 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
PTCH1-225ENST00000551845 UBE2D1P51668 147 aa6.87□□□□□ -1.31
PTCH1-225ENST00000551845 ZC2HC1BQ5TFG8 222 aa6.87□□□□□ -1.31
PTCH1-225ENST00000551845 SDIM1Q6ZPB5 146 aa6.87□□□□□ -1.31
PTCH1-225ENST00000551845 IGHV3-64A0A075B6Q5 118 aa6.86□□□□□ -1.31
PTCH1-225ENST00000551845 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.86□□□□□ -1.31
PTCH1-225ENST00000551845 COX6A2Q02221 97 aa6.86□□□□□ -1.31
PTCH1-225ENST00000551845 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
PTCH1-225ENST00000551845 CHCHD1Q96BP2 118 aaKnown RBP6.86□□□□□ -1.31
PTCH1-225ENST00000551845 DPH3Q96FX2 82 aa6.86□□□□□ -1.31
PTCH1-225ENST00000551845 URB1-AS1Q96HZ7 61 aa6.86□□□□□ -1.31
PTCH1-225ENST00000551845 IGLV4-69A0A075B6H9 119 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 A0A087WZ39 114 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
PTCH1-225ENST00000551845 HBDP02042 147 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 LINC00173Q6ZV60 143 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 FAM19A3Q7Z5A8 133 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
PTCH1-225ENST00000551845 GEMIN7Q9H840 131 aaKnown RBP6.85□□□□□ -1.31
PTCH1-225ENST00000551845 ATP5LO75964 103 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 HERVK_113P63121 156 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 PMVKQ15126 192 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 Q5VSD8 79 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 Q6ZSA8 131 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 C2orf48Q96LS8 159 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 CST9LQ9H4G1 147 aa6.84□□□□□ -1.31
PTCH1-225ENST00000551845 A0A0J9YXV3 536 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 F8WDY8 70 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 SCO1O75880 301 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 NDUFA6P56556 154 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 ORAOV1Q8WV07 137 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 CARD19Q96LW7 228 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 PKIGQ9Y2B9 76 aa6.83□□□□□ -1.32
PTCH1-225ENST00000551845 A0A096LNJ9 63 aa6.82□□□□□ -1.32
PTCH1-225ENST00000551845 HSBP1O75506 76 aa6.82□□□□□ -1.32
PTCH1-225ENST00000551845 SMR3BP02814 79 aaPredicted RBP6.82□□□□□ -1.32
PTCH1-225ENST00000551845 PDZD11Q5EBL8 140 aa6.82□□□□□ -1.32
PTCH1-225ENST00000551845 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
PTCH1-225ENST00000551845 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
PTCH1-225ENST00000551845 S100A1P23297 94 aa6.81□□□□□ -1.32
PTCH1-225ENST00000551845 HAMPP81172 84 aa6.81□□□□□ -1.32
PTCH1-225ENST00000551845 CIRBP-AS1Q8TBR5 109 aa6.81□□□□□ -1.32
PTCH1-225ENST00000551845 CDKN2A-AS1Q9UH64 79 aa6.81□□□□□ -1.32
PTCH1-225ENST00000551845 NDUFA1O15239 70 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 PRSS2P07478 247 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 C6orf226Q5I0X4 101 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 Q6ZRU5 148 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
PTCH1-225ENST00000551845 FAM19A2Q8N3H0 131 aa6.79□□□□□ -1.32
PTCH1-225ENST00000551845 MRPL35Q9NZE8 188 aaKnown RBP6.79□□□□□ -1.32
PTCH1-225ENST00000551845 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
PTCH1-225ENST00000551845 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
PTCH1-225ENST00000551845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
PTCH1-225ENST00000551845 VPS13BQ7Z7G8 4022 aa6.79□□□□□ -1.32
PTCH1-225ENST00000551845 LOC107984640A0A0U1RRK4 108 aa6.78□□□□□ -1.32
PTCH1-225ENST00000551845 TMEM238LA0A1B0GVL6 79 aa6.78□□□□□ -1.32
PTCH1-225ENST00000551845 H3BRM9 83 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms