RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 KIR2DL4Q99706 377 aa10.97□□□□□ -0.65
RPAP3-207ENST00000551293 CARHSP1Q9Y2V2 147 aaKnown RBP10.97□□□□□ -0.65
RPAP3-207ENST00000551293 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
RPAP3-207ENST00000551293 TMEM241Q24JQ0 296 aa10.96□□□□□ -0.65
RPAP3-207ENST00000551293 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.65
RPAP3-207ENST00000551293 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
RPAP3-207ENST00000551293 RETNLBQ9BQ08 111 aa10.96□□□□□ -0.65
RPAP3-207ENST00000551293 A0A087X002 238 aa10.95□□□□□ -0.66
RPAP3-207ENST00000551293 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
RPAP3-207ENST00000551293 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
RPAP3-207ENST00000551293 ZNF861PO60384 105 aa10.94□□□□□ -0.66
RPAP3-207ENST00000551293 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
RPAP3-207ENST00000551293 F8WDY8 70 aa10.93□□□□□ -0.66
RPAP3-207ENST00000551293 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
RPAP3-207ENST00000551293 CT83Q5H943 113 aa10.92□□□□□ -0.66
RPAP3-207ENST00000551293 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
RPAP3-207ENST00000551293 TAGLN2P37802 199 aaKnown RBP10.91□□□□□ -0.66
RPAP3-207ENST00000551293 KIAA0087Q14695 138 aa10.91□□□□□ -0.66
RPAP3-207ENST00000551293 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
RPAP3-207ENST00000551293 TYMSOSQ8TAI1 123 aa10.9□□□□□ -0.66
RPAP3-207ENST00000551293 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
RPAP3-207ENST00000551293 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
RPAP3-207ENST00000551293 NDUFC2-KCTD14E9PQ53 114 aa10.89□□□□□ -0.67
RPAP3-207ENST00000551293 MRPL51Q4U2R6 128 aaKnown RBP10.89□□□□□ -0.67
RPAP3-207ENST00000551293 TGIF2-C20orf24A0A0A6YYL0 155 aa10.88□□□□□ -0.67
RPAP3-207ENST00000551293 PPP1R17O96001 155 aa10.88□□□□□ -0.67
RPAP3-207ENST00000551293 HBBP68871 147 aa10.88□□□□□ -0.67
RPAP3-207ENST00000551293 RIGQ13278 110 aa10.88□□□□□ -0.67
RPAP3-207ENST00000551293 PPP1R2P9O14990 202 aa10.87□□□□□ -0.67
RPAP3-207ENST00000551293 PACRGQ96M98 296 aaPredicted RBP10.87□□□□□ -0.67
RPAP3-207ENST00000551293 BATF3Q9NR55 127 aa10.87□□□□□ -0.67
RPAP3-207ENST00000551293 C22orf24Q9Y442 160 aa10.87□□□□□ -0.67
RPAP3-207ENST00000551293 TRBV30A0A0K0K1B3 111 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 TMEM250H0YL14 139 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 TCAPO15273 167 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 LINC01551Q86U37 167 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 CDIP1Q9H305 208 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 SPANXA1Q9NS26 97 aa10.86□□□□□ -0.67
RPAP3-207ENST00000551293 CRYGAP11844 174 aa10.85□□□□□ -0.67
RPAP3-207ENST00000551293 XAGE1AQ9HD64 81 aa10.85□□□□□ -0.67
RPAP3-207ENST00000551293 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
RPAP3-207ENST00000551293 FAM104BQ5XKR9 115 aa10.84□□□□□ -0.67
RPAP3-207ENST00000551293 SMIM7Q9BQ49 75 aa10.84□□□□□ -0.67
RPAP3-207ENST00000551293 NUPR1O60356 82 aa10.83□□□□□ -0.68
RPAP3-207ENST00000551293 CKS2P33552 79 aa10.83□□□□□ -0.68
RPAP3-207ENST00000551293 LINC00242Q5T6M2 205 aa10.83□□□□□ -0.68
RPAP3-207ENST00000551293 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
RPAP3-207ENST00000551293 OSTCQ9NRP0 149 aa10.83□□□□□ -0.68
RPAP3-207ENST00000551293 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
RPAP3-207ENST00000551293 SLC51BQ86UW2 128 aa10.82□□□□□ -0.68
RPAP3-207ENST00000551293 V9GYV3 84 aa10.82□□□□□ -0.68
RPAP3-207ENST00000551293 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
RPAP3-207ENST00000551293 KRTAP13-2Q52LG2 175 aa10.81□□□□□ -0.68
RPAP3-207ENST00000551293 SMIM2Q9BVW6 85 aa10.81□□□□□ -0.68
RPAP3-207ENST00000551293 TOMM7Q9P0U1 55 aa10.81□□□□□ -0.68
RPAP3-207ENST00000551293 ZNF727A8MUV8 499 aa10.8□□□□□ -0.68
RPAP3-207ENST00000551293 ZC2HC1BQ5TFG8 222 aa10.8□□□□□ -0.68
RPAP3-207ENST00000551293 TRBV24-1A0A075B6N3 115 aa10.79□□□□□ -0.68
RPAP3-207ENST00000551293 BCE1O60756 84 aa10.79□□□□□ -0.68
RPAP3-207ENST00000551293 NPYP01303 97 aa10.79□□□□□ -0.68
RPAP3-207ENST00000551293 LBHQ53QV2 105 aaPredicted RBP10.79□□□□□ -0.68
RPAP3-207ENST00000551293 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
RPAP3-207ENST00000551293 RPL37AP8A6NKH3 93 aa10.78□□□□□ -0.68
RPAP3-207ENST00000551293 D6R8Y8 96 aa10.78□□□□□ -0.68
RPAP3-207ENST00000551293 RPL32P62910 135 aaKnown RBP10.78□□□□□ -0.68
RPAP3-207ENST00000551293 NAT8BQ9UHF3 227 aa10.78□□□□□ -0.68
RPAP3-207ENST00000551293 FSIP2Q5CZC0 6907 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 IGLV4-3A0A075B6K6 122 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 LINC00862A6NCI5 91 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 PRSS2P07478 247 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 IFI27P40305 119 aaPredicted RBP10.77□□□□□ -0.69
RPAP3-207ENST00000551293 CKS1BP61024 79 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 ALKAL2Q6UX46 152 aa10.77□□□□□ -0.69
RPAP3-207ENST00000551293 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
RPAP3-207ENST00000551293 EIF5A2Q9GZV4 153 aaKnown RBP10.77□□□□□ -0.69
RPAP3-207ENST00000551293 LINC00304Q8N9R0 145 aa10.76□□□□□ -0.69
RPAP3-207ENST00000551293 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
RPAP3-207ENST00000551293 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
RPAP3-207ENST00000551293 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
RPAP3-207ENST00000551293 BLOC1S1P78537 153 aa10.74□□□□□ -0.69
RPAP3-207ENST00000551293 FAM74A3Q4VXF1 159 aa10.74□□□□□ -0.69
RPAP3-207ENST00000551293 C6orf226Q5I0X4 101 aa10.74□□□□□ -0.69
RPAP3-207ENST00000551293 MRPL54Q6P161 138 aaKnown RBP10.73□□□□□ -0.69
RPAP3-207ENST00000551293 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
RPAP3-207ENST00000551293 LINC00167Q96N53 147 aa10.73□□□□□ -0.69
RPAP3-207ENST00000551293 SRP19P09132 144 aaKnown RBP10.72□□□□□ -0.69
RPAP3-207ENST00000551293 RAB5AP20339 215 aa10.72□□□□□ -0.69
RPAP3-207ENST00000551293 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
RPAP3-207ENST00000551293 Q6ZN92 141 aa10.71□□□□□ -0.69
RPAP3-207ENST00000551293 ALKBH7Q9BT30 221 aaPredicted RBP10.71□□□□□ -0.69
RPAP3-207ENST00000551293 SMIM27A0A1W2PRY6 76 aa10.7□□□□□ -0.7
RPAP3-207ENST00000551293 UBE2AP49459 152 aa10.7□□□□□ -0.7
RPAP3-207ENST00000551293 ADIRFQ15847 76 aa10.7□□□□□ -0.7
RPAP3-207ENST00000551293 PYGO1Q9Y3Y4 419 aa10.7□□□□□ -0.7
RPAP3-207ENST00000551293 LOC389332A0A1B0GUA5 103 aa10.69□□□□□ -0.7
RPAP3-207ENST00000551293 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
RPAP3-207ENST00000551293 LINC01561Q8N1V8 128 aa10.69□□□□□ -0.7
RPAP3-207ENST00000551293 C2orf88Q9BSF0 95 aa10.69□□□□□ -0.7
RPAP3-207ENST00000551293 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
RPAP3-207ENST00000551293 TP73-AS1Q9UF72 201 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms