RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 HERVK_113P63121 156 aa6.54□□□□□ -1.36
PFDN5-213ENST00000550964 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
PFDN5-213ENST00000550964 C2orf48Q96LS8 159 aa6.54□□□□□ -1.36
PFDN5-213ENST00000550964 AMELXQ99217 191 aa6.54□□□□□ -1.36
PFDN5-213ENST00000550964 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 HBDP02042 147 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 KRTAP10-1P60331 282 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 FAM19A3Q7Z5A8 133 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 C15orf56Q8N910 161 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
PFDN5-213ENST00000550964 IGHV3OR16-9A0A0B4J2B5 98 aa6.52□□□□□ -1.37
PFDN5-213ENST00000550964 ATP5LO75964 103 aa6.52□□□□□ -1.37
PFDN5-213ENST00000550964 RNASE13Q5GAN3 156 aaKnown RBP6.52□□□□□ -1.37
PFDN5-213ENST00000550964 Q6ZSA8 131 aa6.52□□□□□ -1.37
PFDN5-213ENST00000550964 YPEL4Q96NS1 127 aa6.52□□□□□ -1.37
PFDN5-213ENST00000550964 GEMIN7Q9H840 131 aaKnown RBP6.52□□□□□ -1.37
PFDN5-213ENST00000550964 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 A0A087WZ39 114 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 UBE2D1P51668 147 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 SYCNQ0VAF6 134 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 PMVKQ15126 192 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 RNF151Q2KHN1 245 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 Q8N1X5 172 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 DPH3Q96FX2 82 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 CARD19Q96LW7 228 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 PACRGQ96M98 296 aaPredicted RBP6.51□□□□□ -1.37
PFDN5-213ENST00000550964 CHAC1Q9BUX1 264 aa6.51□□□□□ -1.37
PFDN5-213ENST00000550964 PRSS2P07478 247 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 HIGD2BQ4VC39 106 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 LINC00242Q5T6M2 205 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
PFDN5-213ENST00000550964 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
PFDN5-213ENST00000550964 EPM2AB3EWF7 344 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 H3BRM9 83 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 NDUFA1O15239 70 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 HSBP1O75506 76 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 PLA2G1BP04054 148 aaKnown RBP6.49□□□□□ -1.37
PFDN5-213ENST00000550964 XGP55808 180 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 SPAG11BQ08648 103 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 ORAOV1Q8WV07 137 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 FAM104AQ969W3 186 aa6.49□□□□□ -1.37
PFDN5-213ENST00000550964 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
PFDN5-213ENST00000550964 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
PFDN5-213ENST00000550964 TINCRA0A1B0GVN0 87 aa6.48□□□□□ -1.37
PFDN5-213ENST00000550964 S100A1P23297 94 aa6.48□□□□□ -1.37
PFDN5-213ENST00000550964 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
PFDN5-213ENST00000550964 TRGC2P03986 189 aa6.47□□□□□ -1.37
PFDN5-213ENST00000550964 CXCL5P42830 114 aa6.47□□□□□ -1.37
PFDN5-213ENST00000550964 CKS1BP61024 79 aa6.47□□□□□ -1.37
PFDN5-213ENST00000550964 LINC00173Q6ZV60 143 aa6.47□□□□□ -1.37
PFDN5-213ENST00000550964 CST9LQ9H4G1 147 aa6.47□□□□□ -1.37
PFDN5-213ENST00000550964 MRPL35Q9NZE8 188 aaKnown RBP6.47□□□□□ -1.37
PFDN5-213ENST00000550964 TRBV30A0A0K0K1B3 111 aa6.46□□□□□ -1.38
PFDN5-213ENST00000550964 COLCA2A8K830 154 aa6.46□□□□□ -1.38
PFDN5-213ENST00000550964 CIRBPQ14011 172 aaKnown RBP6.46□□□□□ -1.38
PFDN5-213ENST00000550964 C6orf226Q5I0X4 101 aa6.46□□□□□ -1.38
PFDN5-213ENST00000550964 SFTA2Q6UW10 78 aa6.46□□□□□ -1.38
PFDN5-213ENST00000550964 Q8IZM0 81 aa6.46□□□□□ -1.38
PFDN5-213ENST00000550964 SLPIP03973 132 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 NDUFA6P56556 154 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 COX6A2Q02221 97 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 LINC01620Q4KN68 170 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 PDZD11Q5EBL8 140 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 LINC00469Q8N7U9 141 aa6.45□□□□□ -1.38
PFDN5-213ENST00000550964 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 HSPG2P98160 4391 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 IGLV5-45A0A087WSX0 123 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 TRAV12-1A0A0B4J245 112 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 SCXQ7RTU7 201 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 CIRBP-AS1Q8TBR5 109 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
PFDN5-213ENST00000550964 A0A0J9YXV3 536 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 LEPROTL1O95214 131 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 Q6ZRU5 148 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 SPACA4Q8TDM5 124 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 IFI27L1Q96BM0 104 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 URB1-AS1Q96HZ7 61 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 CDKN2A-AS1Q9UH64 79 aa6.43□□□□□ -1.38
PFDN5-213ENST00000550964 F8VRH5 84 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 IGLC3P0DOY3 106 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 MAJINQ3KP22 176 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 Q5VSD8 79 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
PFDN5-213ENST00000550964 A0A096LNJ9 63 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 IGKV2-24A0A0C4DH68 120 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 PTTG1IPP53801 180 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 KIAA0087Q14695 138 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 LINC00528Q8N1L1 170 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 LINC00526Q96FQ7 95 aa6.41□□□□□ -1.38
PFDN5-213ENST00000550964 CHTOPQ9Y3Y2 248 aaKnown RBP6.41□□□□□ -1.38
PFDN5-213ENST00000550964 A0A087WYN8 130 aa6.4□□□□□ -1.38
PFDN5-213ENST00000550964 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms