RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 MGST1P10620 155 aaKnown RBP2.22□□□□□ -2.05
LIMA1-206ENST00000550611 ATP6V0CP27449 155 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 HSD52Q0P140 79 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 IL15RAQ13261 267 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 UFSP1Q6NVU6 142 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 KRTAP26-1Q6PEX3 210 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 MIR17HGQ75NE6 70 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 CYB561D1Q8N8Q1 229 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 OR5A1Q8NGJ0 315 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 OR2G3Q8NGZ4 309 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 RMI2Q96E14 147 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 C9orf85Q96MD7 179 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 HIST1H2BLQ99880 126 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 DERL1Q9BUN8 251 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 SH3BGRL3Q9H299 93 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 MAP1LC3AQ9H492 121 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 DHRS4-AS1Q9P1J3 65 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 UQCR10Q9UDW1 63 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 CYSLTR1Q9Y271 337 aa2.22□□□□□ -2.05
LIMA1-206ENST00000550611 IGKV2D-24A0A075B6R9 120 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 A0A087WWC5 75 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 IGHV3-73A0A0B4J1V6 119 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 TRAV21A0A0B4J279 112 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 A0A0J9YXV3 536 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 A0A1W2PRE2 83 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 C7orf77A4D0Y5 90 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 A6NDN8 102 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 PLA2G10O15496 165 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 CST7O76096 145 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 NDUFB6O95139 128 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 RNASE3P12724 160 aaKnown RBP2.21□□□□□ -2.06
LIMA1-206ENST00000550611 NTF3P20783 257 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 RPS28P62857 69 aaKnown RBP2.21□□□□□ -2.06
LIMA1-206ENST00000550611 FAM162BQ5T6X4 162 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 ENHOQ6UWT2 76 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 ZFP2Q6ZN57 461 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 TOMM5Q8N4H5 51 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 TMEM252Q8N6L7 170 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 UBE2WQ96B02 151 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 KCNS1Q96KK3 526 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 C2orf50Q96LR7 162 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 CHCHD7Q9BUK0 85 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 VAMP8Q9BV40 100 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 ZNF471Q9BX82 626 aaPredicted RBP2.21□□□□□ -2.06
LIMA1-206ENST00000550611 SPANXDQ9BXN6 97 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 SAMD10Q9BYL1 202 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 KLK12Q9UKR0 248 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 V9GYH0 126 aa2.21□□□□□ -2.06
LIMA1-206ENST00000550611 TINCRA0A1B0GVN0 87 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 NAP1L6A6NFF2 107 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.2□□□□□ -2.06
LIMA1-206ENST00000550611 J3KT08 172 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 K7EN84 100 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 SEC11BP0C7V7 166 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 RPL12P30050 165 aaKnown RBP2.2□□□□□ -2.06
LIMA1-206ENST00000550611 CSN1S1P47710 185 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 ZNF80P51504 273 aaPredicted RBP2.2□□□□□ -2.06
LIMA1-206ENST00000550611 MEF2BQ02080 365 aaPredicted RBP2.2□□□□□ -2.06
LIMA1-206ENST00000550611 Q0VG73 95 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 ADIRFQ15847 76 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 Q6ZN92 141 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 C14orf178Q8N769 122 aaPredicted RBP2.2□□□□□ -2.06
LIMA1-206ENST00000550611 RNF185Q96GF1 192 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 NDFIP1Q9BT67 221 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 NPCDR1Q9BY65 106 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 PLAC8Q9NZF1 115 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
LIMA1-206ENST00000550611 A0A087WX48 190 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 FXYD6-FXYD2A0A087WZ82 144 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 UBE2L5PA0A1B0GUS4 154 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 PGPA6NDG6 321 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 B4DEV8 164 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 TAAR5O14804 337 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BKO60814 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BJP06899 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 TRGC1P0CF51 173 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 TPT1P13693 172 aaKnown RBP2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BOP23527 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BBP33778 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 BTCP35070 178 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BDP58876 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 CNBPP62633 177 aaKnown RBP2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BCP62807 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 ELOBQ15370 118 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 TAL2Q16559 108 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST2H2BEQ16778 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 COA6Q5JTJ3 125 aaKnown RBP2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.19□□□□□ -2.06
LIMA1-206ENST00000550611 LINC00242Q5T6M2 205 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 AMMECR1LQ6DCA0 310 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 KCNRGQ8N5I3 272 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BHQ93079 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 ZC2HC1AQ96GY0 325 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 ATP5SQ99766 215 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BNQ99877 126 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 HIST1H2BMQ99879 126 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms