RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 SFTA2Q6UW10 78 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 SHISA2Q6UWI4 295 aa14.6□□□□□ -0.07
PRDM4-205ENST00000550376 TIRAPP58753 221 aa14.59□□□□□ -0.07
PRDM4-205ENST00000550376 MGAM2Q2M2H8 2515 aa14.59□□□□□ -0.07
PRDM4-205ENST00000550376 MIFP14174 115 aa14.59□□□□□ -0.07
PRDM4-205ENST00000550376 ZNF625Q96I27 306 aaPredicted RBP14.59□□□□□ -0.07
PRDM4-205ENST00000550376 A0A1W2PPM0 123 aa14.58□□□□□ -0.08
PRDM4-205ENST00000550376 GAGE10A6NGK3 116 aa14.58□□□□□ -0.08
PRDM4-205ENST00000550376 NPC2P61916 151 aa14.58□□□□□ -0.08
PRDM4-205ENST00000550376 Q8N3U1 123 aa14.58□□□□□ -0.08
PRDM4-205ENST00000550376 ADAMTSL4-AS1Q5T5F5 129 aa14.58□□□□□ -0.08
PRDM4-205ENST00000550376 CLPSL2Q6UWE3 100 aa14.57□□□□□ -0.08
PRDM4-205ENST00000550376 IGLL5B9A064 214 aa14.57□□□□□ -0.08
PRDM4-205ENST00000550376 HERVK_113P63121 156 aa14.57□□□□□ -0.08
PRDM4-205ENST00000550376 IGLV5-45A0A087WSX0 123 aa14.56□□□□□ -0.08
PRDM4-205ENST00000550376 DAND5Q8N907 189 aa14.56□□□□□ -0.08
PRDM4-205ENST00000550376 A0A0U1RRA0 63 aa14.56□□□□□ -0.08
PRDM4-205ENST00000550376 SPART-AS1P0CW21 52 aa14.56□□□□□ -0.08
PRDM4-205ENST00000550376 PRSS2P07478 247 aa14.55□□□□□ -0.08
PRDM4-205ENST00000550376 MUSTN1Q8IVN3 82 aa14.55□□□□□ -0.08
PRDM4-205ENST00000550376 ATP5G1P05496 136 aa14.54□□□□□ -0.08
PRDM4-205ENST00000550376 SPCS1Q9Y6A9 102 aa14.54□□□□□ -0.08
PRDM4-205ENST00000550376 SMIM1B2RUZ4 78 aa14.54□□□□□ -0.08
PRDM4-205ENST00000550376 SPANXB1Q9NS25 103 aaPredicted RBP14.54□□□□□ -0.08
PRDM4-205ENST00000550376 LITAFQ99732 161 aa14.53□□□□□ -0.08
PRDM4-205ENST00000550376 EGFEM1PQ0D2K5 195 aa14.53□□□□□ -0.08
PRDM4-205ENST00000550376 PGPEP1Q9NXJ5 209 aa14.53□□□□□ -0.08
PRDM4-205ENST00000550376 CFC1BP0CG36 223 aa14.52□□□□□ -0.08
PRDM4-205ENST00000550376 CFC1P0CG37 223 aa14.52□□□□□ -0.08
PRDM4-205ENST00000550376 FABP2P12104 132 aa14.52□□□□□ -0.08
PRDM4-205ENST00000550376 A4D1N5 150 aa14.52□□□□□ -0.09
PRDM4-205ENST00000550376 ZFAND6Q6FIF0 208 aa14.52□□□□□ -0.09
PRDM4-205ENST00000550376 A0A1B0GWB2 263 aa14.51□□□□□ -0.09
PRDM4-205ENST00000550376 EIF4EBP3O60516 100 aaPredicted RBP14.51□□□□□ -0.09
PRDM4-205ENST00000550376 Q9H8V8 135 aa14.51□□□□□ -0.09
PRDM4-205ENST00000550376 H7C423 109 aa14.51□□□□□ -0.09
PRDM4-205ENST00000550376 K7EP34 96 aa14.5□□□□□ -0.09
PRDM4-205ENST00000550376 SMAGPQ0VAQ4 97 aa14.5□□□□□ -0.09
PRDM4-205ENST00000550376 DNAH3Q8TD57 4116 aa14.5□□□□□ -0.09
PRDM4-205ENST00000550376 IGLV5-39A0A0G2JS06 123 aa14.49□□□□□ -0.09
PRDM4-205ENST00000550376 FAM19A3Q7Z5A8 133 aa14.49□□□□□ -0.09
PRDM4-205ENST00000550376 C5orf38Q86SI9 138 aa14.49□□□□□ -0.09
PRDM4-205ENST00000550376 TMEM238LA0A1B0GVL6 79 aa14.49□□□□□ -0.09
PRDM4-205ENST00000550376 A6NJY4 79 aa14.49□□□□□ -0.09
PRDM4-205ENST00000550376 TMEM238C9JI98 176 aa14.48□□□□□ -0.09
PRDM4-205ENST00000550376 TOMM7Q9P0U1 55 aa14.48□□□□□ -0.09
PRDM4-205ENST00000550376 H7C2G1 150 aa14.47□□□□□ -0.09
PRDM4-205ENST00000550376 GTF2H5Q6ZYL4 71 aa14.47□□□□□ -0.09
PRDM4-205ENST00000550376 XCL1P47992 114 aa14.46□□□□□ -0.09
PRDM4-205ENST00000550376 K7ERU9 68 aa14.46□□□□□ -0.09
PRDM4-205ENST00000550376 TSPAN13O95857 204 aa14.46□□□□□ -0.09
PRDM4-205ENST00000550376 LINC00959A0A1B0GUT2 108 aa14.45□□□□□ -0.1
PRDM4-205ENST00000550376 MTURNQ8N3F0 131 aa14.45□□□□□ -0.1
PRDM4-205ENST00000550376 NDUFA1O15239 70 aa14.44□□□□□ -0.1
PRDM4-205ENST00000550376 LINC00269Q8N2A0 174 aa14.44□□□□□ -0.1
PRDM4-205ENST00000550376 IGLV10-54A0A075B6I4 117 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 IGHV3OR16-9A0A0B4J2B5 98 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 Q6ZTC4 211 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 LOC107984156A0A0G2JMH3 177 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 H3BMG7 143 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 ARL17AQ8IVW1 177 aa14.43□□□□□ -0.1
PRDM4-205ENST00000550376 C11orf68Q9H3H3 251 aaKnown RBP14.42□□□□□ -0.1
PRDM4-205ENST00000550376 A0A0J9YWU9 116 aa14.41□□□□□ -0.1
PRDM4-205ENST00000550376 RPL24P83731 157 aaKnown RBP14.41□□□□□ -0.1
PRDM4-205ENST00000550376 MRPL23Q16540 153 aaKnown RBP14.41□□□□□ -0.1
PRDM4-205ENST00000550376 MRAPQ8TCY5 172 aa14.41□□□□□ -0.1
PRDM4-205ENST00000550376 ANGP03950 147 aaKnown RBP14.4□□□□□ -0.1
PRDM4-205ENST00000550376 MIAQ16674 131 aa14.4□□□□□ -0.1
PRDM4-205ENST00000550376 A0A1B0GUV1 79 aa14.4□□□□□ -0.1
PRDM4-205ENST00000550376 PRO1854Q9UHT4 67 aa14.4□□□□□ -0.1
PRDM4-205ENST00000550376 MEIG1Q5JSS6 88 aa14.39□□□□□ -0.11
PRDM4-205ENST00000550376 ICOSQ9Y6W8 199 aa14.39□□□□□ -0.11
PRDM4-205ENST00000550376 NANOS2P60321 138 aaKnown RBP14.38□□□□□ -0.11
PRDM4-205ENST00000550376 COX7B2Q8TF08 81 aa14.38□□□□□ -0.11
PRDM4-205ENST00000550376 SPANXDQ9BXN6 97 aa14.37□□□□□ -0.11
PRDM4-205ENST00000550376 SPANXCQ9NY87 97 aa14.37□□□□□ -0.11
PRDM4-205ENST00000550376 DEFB121Q5J5C9 76 aa14.36□□□□□ -0.11
PRDM4-205ENST00000550376 A0A087WZ39 114 aa14.35□□□□□ -0.11
PRDM4-205ENST00000550376 SS18Q15532 418 aa14.35□□□□□ -0.11
PRDM4-205ENST00000550376 IGHV3-33P01772 117 aa14.34□□□□□ -0.11
PRDM4-205ENST00000550376 PSMB2P49721 201 aa14.34□□□□□ -0.11
PRDM4-205ENST00000550376 CIRBPQ14011 172 aaKnown RBP14.34□□□□□ -0.11
PRDM4-205ENST00000550376 SOSTDC1Q6X4U4 206 aa14.34□□□□□ -0.11
PRDM4-205ENST00000550376 REG3AQ06141 175 aa14.34□□□□□ -0.11
PRDM4-205ENST00000550376 KPRPQ5T749 579 aaPredicted RBP14.34□□□□□ -0.11
PRDM4-205ENST00000550376 LYPD5Q6UWN5 251 aa14.34□□□□□ -0.11
PRDM4-205ENST00000550376 LINC00308Q8TCZ7 52 aa14.33□□□□□ -0.12
PRDM4-205ENST00000550376 MDFIQ99750 246 aa14.33□□□□□ -0.12
PRDM4-205ENST00000550376 Q1RN00 199 aa14.32□□□□□ -0.12
PRDM4-205ENST00000550376 WFDC2Q14508 124 aa14.32□□□□□ -0.12
PRDM4-205ENST00000550376 ERG28Q9UKR5 140 aa14.32□□□□□ -0.12
PRDM4-205ENST00000550376 SCGB1C2P0DMR2 95 aa14.31□□□□□ -0.12
PRDM4-205ENST00000550376 LELP1Q5T871 98 aa14.31□□□□□ -0.12
PRDM4-205ENST00000550376 C2orf82Q6UX34 121 aa14.31□□□□□ -0.12
PRDM4-205ENST00000550376 KLK12Q9UKR0 248 aa14.31□□□□□ -0.12
PRDM4-205ENST00000550376 TIMM17BO60830 172 aa14.31□□□□□ -0.12
PRDM4-205ENST00000550376 CHCHD10Q8WYQ3 142 aaPredicted RBP14.31□□□□□ -0.12
PRDM4-205ENST00000550376 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.3□□□□□ -0.12
PRDM4-205ENST00000550376 A0A0B4J2C4 111 aa14.3□□□□□ -0.12
PRDM4-205ENST00000550376 K7EIL1 84 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms