RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 Q6ZUT4 128 aa8.81□□□□□ -1
NUP188-211ENST00000550219 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
NUP188-211ENST00000550219 COX11Q9Y6N1 276 aa8.81□□□□□ -1
NUP188-211ENST00000550219 J3QL48 77 aa8.8□□□□□ -1
NUP188-211ENST00000550219 ENHOQ6UWT2 76 aa8.8□□□□□ -1
NUP188-211ENST00000550219 LINC00269Q8N2A0 174 aa8.8□□□□□ -1
NUP188-211ENST00000550219 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
NUP188-211ENST00000550219 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
NUP188-211ENST00000550219 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
NUP188-211ENST00000550219 HERC1Q15751 4861 aa8.79□□□□□ -1
NUP188-211ENST00000550219 ATP5LO75964 103 aa8.79□□□□□ -1
NUP188-211ENST00000550219 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
NUP188-211ENST00000550219 Q6ZSA8 131 aa8.79□□□□□ -1
NUP188-211ENST00000550219 SCXQ7RTU7 201 aa8.79□□□□□ -1
NUP188-211ENST00000550219 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
NUP188-211ENST00000550219 AMELXQ99217 191 aa8.79□□□□□ -1
NUP188-211ENST00000550219 CRPP02741 224 aa8.78□□□□□ -1
NUP188-211ENST00000550219 S100A6P06703 90 aa8.78□□□□□ -1
NUP188-211ENST00000550219 REG3AQ06141 175 aa8.78□□□□□ -1
NUP188-211ENST00000550219 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
NUP188-211ENST00000550219 C5orf52A6NGY3 159 aa8.77□□□□□ -1.01
NUP188-211ENST00000550219 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1.01
NUP188-211ENST00000550219 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
NUP188-211ENST00000550219 LINC00173Q6ZV60 143 aa8.77□□□□□ -1.01
NUP188-211ENST00000550219 C1orf43Q9BWL3 253 aa8.77□□□□□ -1.01
NUP188-211ENST00000550219 FLG2Q5D862 2391 aaPredicted RBP8.77□□□□□ -1.01
NUP188-211ENST00000550219 MYCBP2O75592 4640 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 MIAQ16674 131 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
NUP188-211ENST00000550219 Q6ZN92 141 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 HIST3H2BBQ8N257 126 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 IFI27L1Q96BM0 104 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 VCX2Q9H322 139 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 HSPB8Q9UJY1 196 aa8.76□□□□□ -1.01
NUP188-211ENST00000550219 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 TRAV8-4A0A0B4J246 113 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 LINC00959A0A1B0GUT2 108 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 CCL25O15444 150 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
NUP188-211ENST00000550219 ZC2HC1BQ5TFG8 222 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 CLPSL2Q6UWE3 100 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 TEX43Q6ZNM6 134 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
NUP188-211ENST00000550219 FABP4P15090 132 aa8.74□□□□□ -1.01
NUP188-211ENST00000550219 PMVKQ15126 192 aa8.74□□□□□ -1.01
NUP188-211ENST00000550219 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
NUP188-211ENST00000550219 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
NUP188-211ENST00000550219 TRAV12-1A0A0B4J245 112 aa8.73□□□□□ -1.01
NUP188-211ENST00000550219 IFITM10A6NMD0 228 aa8.73□□□□□ -1.01
NUP188-211ENST00000550219 UBE2D1P51668 147 aa8.73□□□□□ -1.01
NUP188-211ENST00000550219 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
NUP188-211ENST00000550219 C2orf88Q9BSF0 95 aa8.73□□□□□ -1.01
NUP188-211ENST00000550219 SRRM2Q9UQ35 2752 aaKnown RBP8.73□□□□□ -1.01
NUP188-211ENST00000550219 TRAV13-1A0A0B4J241 112 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 IGKV3OR2-268A0A0C4DH90 116 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 SS18Q15532 418 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 CIRBP-AS1Q8TBR5 109 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 CHAC1Q9BUX1 264 aa8.72□□□□□ -1.01
NUP188-211ENST00000550219 TMA7Q9Y2S6 64 aaKnown RBP8.72□□□□□ -1.01
NUP188-211ENST00000550219 PRSS1P07477 247 aa8.71□□□□□ -1.02
NUP188-211ENST00000550219 S100A2P29034 98 aa8.71□□□□□ -1.02
NUP188-211ENST00000550219 CHCHD10Q8WYQ3 142 aaPredicted RBP8.71□□□□□ -1.02
NUP188-211ENST00000550219 IGLV10-54A0A075B6I4 117 aa8.7□□□□□ -1.02
NUP188-211ENST00000550219 USP17L23D6RBM5 183 aa8.7□□□□□ -1.02
NUP188-211ENST00000550219 LINC00242Q5T6M2 205 aa8.7□□□□□ -1.02
NUP188-211ENST00000550219 MAP1LC3CQ9BXW4 147 aa8.7□□□□□ -1.02
NUP188-211ENST00000550219 FOXI1Q12951 378 aa8.69□□□□□ -1.02
NUP188-211ENST00000550219 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
NUP188-211ENST00000550219 IGLV4-69A0A075B6H9 119 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 A0A0J9YXV3 536 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 TINCRA0A1B0GVN0 87 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
NUP188-211ENST00000550219 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 C3orf79P0CE67 100 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 XCL1P47992 114 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 SEC11AP67812 179 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 COX6A2Q02221 97 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 ODF1Q14990 250 aa8.68□□□□□ -1.02
NUP188-211ENST00000550219 IGLV5-45A0A087WSX0 123 aa8.67□□□□□ -1.02
NUP188-211ENST00000550219 F8VRH5 84 aa8.67□□□□□ -1.02
NUP188-211ENST00000550219 HERVK_113P63121 156 aa8.67□□□□□ -1.02
NUP188-211ENST00000550219 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
NUP188-211ENST00000550219 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
NUP188-211ENST00000550219 MRPL35Q9NZE8 188 aaKnown RBP8.66□□□□□ -1.02
NUP188-211ENST00000550219 KRTAP10-4P60372 401 aaPredicted RBP8.65□□□□□ -1.02
NUP188-211ENST00000550219 KRTDAPP60985 99 aa8.65□□□□□ -1.02
NUP188-211ENST00000550219 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
NUP188-211ENST00000550219 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
NUP188-211ENST00000550219 LINC01561Q8N1V8 128 aa8.65□□□□□ -1.02
NUP188-211ENST00000550219 GEMIN7Q9H840 131 aaKnown RBP8.65□□□□□ -1.02
NUP188-211ENST00000550219 A0A087WZ39 114 aa8.64□□□□□ -1.03
NUP188-211ENST00000550219 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
NUP188-211ENST00000550219 H0Y8G0 127 aa8.64□□□□□ -1.03
NUP188-211ENST00000550219 COX7A2LO14548 114 aa8.63□□□□□ -1.03
NUP188-211ENST00000550219 C5orf38Q86SI9 138 aa8.63□□□□□ -1.03
NUP188-211ENST00000550219 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms