RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 IGHV3-64A0A075B6Q5 118 aa9.71□□□□□ -0.86
GPN3-206ENST00000549963 IGHV3OR16-9A0A0B4J2B5 98 aa9.71□□□□□ -0.86
GPN3-206ENST00000549963 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
GPN3-206ENST00000549963 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
GPN3-206ENST00000549963 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
GPN3-206ENST00000549963 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
GPN3-206ENST00000549963 ATP5LO75964 103 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 S100A1P23297 94 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 HERVK_113P63121 156 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 PMVKQ15126 192 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
GPN3-206ENST00000549963 A0A087WZ39 114 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 HSBP1O75506 76 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 NDUFA6P56556 154 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
GPN3-206ENST00000549963 IGLV4-69A0A075B6H9 119 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 F8WDY8 70 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 SCO1O75880 301 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 SLPIP03973 132 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 COX6A2Q02221 97 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 SYCNQ0VAF6 134 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 PMCHL1Q16048 86 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
GPN3-206ENST00000549963 XGP55808 180 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 SDIM1Q6ZPB5 146 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 CARD19Q96LW7 228 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 CAMK2N2Q96S95 79 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 FAM30AQ9NZY2 134 aa9.66□□□□□ -0.86
GPN3-206ENST00000549963 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
GPN3-206ENST00000549963 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.86
GPN3-206ENST00000549963 Q6ZSA8 131 aa9.65□□□□□ -0.86
GPN3-206ENST00000549963 LINC00526Q96FQ7 95 aa9.65□□□□□ -0.86
GPN3-206ENST00000549963 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
GPN3-206ENST00000549963 DYNC1H1Q14204 4646 aaKnown RBP9.65□□□□□ -0.86
GPN3-206ENST00000549963 A0A096LNJ9 63 aa9.64□□□□□ -0.87
GPN3-206ENST00000549963 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
GPN3-206ENST00000549963 PRSS2P07478 247 aa9.64□□□□□ -0.87
GPN3-206ENST00000549963 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
GPN3-206ENST00000549963 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
GPN3-206ENST00000549963 DNAH5Q8TE73 4624 aa9.63□□□□□ -0.87
GPN3-206ENST00000549963 NDUFA1O15239 70 aa9.62□□□□□ -0.87
GPN3-206ENST00000549963 LINC00474Q9P2X8 69 aa9.62□□□□□ -0.87
GPN3-206ENST00000549963 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
GPN3-206ENST00000549963 FAM229AH3BQW9 127 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 H3BRM9 83 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 SERF1AO75920 110 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 Q8N1X5 172 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 IFI27L1Q96BM0 104 aa9.61□□□□□ -0.87
GPN3-206ENST00000549963 LRP1BQ9NZR2 4599 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 CKS1BP61024 79 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 Q6ZRU5 148 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
GPN3-206ENST00000549963 HAMPP81172 84 aa9.59□□□□□ -0.87
GPN3-206ENST00000549963 SCXQ7RTU7 201 aa9.59□□□□□ -0.87
GPN3-206ENST00000549963 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
GPN3-206ENST00000549963 ATP6V1G1O75348 118 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 LEPROTL1O95214 131 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 SMR3BP02814 79 aaPredicted RBP9.58□□□□□ -0.88
GPN3-206ENST00000549963 Q8IZM0 81 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 CHTOPQ9Y3Y2 248 aaKnown RBP9.58□□□□□ -0.88
GPN3-206ENST00000549963 KIAA1109Q2LD37 5005 aa9.58□□□□□ -0.88
GPN3-206ENST00000549963 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 IGKV2-24A0A0C4DH68 120 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 EPM2AB3EWF7 344 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 IGLC3P0DOY3 106 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 KIAA0087Q14695 138 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 MAJINQ3KP22 176 aa9.57□□□□□ -0.88
GPN3-206ENST00000549963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
GPN3-206ENST00000549963 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BKO60814 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BJP06899 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BOP23527 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BBP33778 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BDP58876 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BCP62807 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 CIRBPQ14011 172 aaKnown RBP9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST2H2BEQ16778 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.56□□□□□ -0.88
GPN3-206ENST00000549963 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BHQ93079 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BNQ99877 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 HIST1H2BMQ99879 126 aa9.56□□□□□ -0.88
GPN3-206ENST00000549963 CXCL5P42830 114 aa9.55□□□□□ -0.88
GPN3-206ENST00000549963 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
GPN3-206ENST00000549963 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 190.2 ms