RNA–Protein interactions for RNA: ENST00000549678.1

PTCH1-219, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-219ENST00000549678 PKIGQ9Y2B9 76 aa4.73□□□□□ -1.65
PTCH1-219ENST00000549678 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
PTCH1-219ENST00000549678 CNBPP62633 177 aaKnown RBP4.72□□□□□ -1.65
PTCH1-219ENST00000549678 MRPS36P82909 103 aaKnown RBP4.72□□□□□ -1.65
PTCH1-219ENST00000549678 PAPPA-AS1Q5QFB9 102 aa4.72□□□□□ -1.65
PTCH1-219ENST00000549678 SCXQ7RTU7 201 aa4.72□□□□□ -1.65
PTCH1-219ENST00000549678 CARD19Q96LW7 228 aa4.72□□□□□ -1.65
PTCH1-219ENST00000549678 VCX2Q9H322 139 aa4.72□□□□□ -1.65
PTCH1-219ENST00000549678 FAM30AQ9NZY2 134 aa4.72□□□□□ -1.65
PTCH1-219ENST00000549678 IGLV4-3A0A075B6K6 122 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 GVQW2A0A096LPI5 108 aaPredicted RBP4.71□□□□□ -1.66
PTCH1-219ENST00000549678 IGKV2-24A0A0C4DH68 120 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 Q6ZSA8 131 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 ORAOV1Q8WV07 137 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00526Q96FQ7 95 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 SCGB3A1Q96QR1 104 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 CAMK2N2Q96S95 79 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 ALKBH7Q9BT30 221 aaPredicted RBP4.71□□□□□ -1.66
PTCH1-219ENST00000549678 PYGO1Q9Y3Y4 419 aa4.71□□□□□ -1.66
PTCH1-219ENST00000549678 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 IGLV4-69A0A075B6H9 119 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 LINC01549A6NIU2 74 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 PLA2G1BP04054 148 aaKnown RBP4.7□□□□□ -1.66
PTCH1-219ENST00000549678 SPAG11BQ08648 103 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 SYCNQ0VAF6 134 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 SLC7A5P1Q8MH63 180 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00528Q8N1L1 170 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 PACRGQ96M98 296 aaPredicted RBP4.7□□□□□ -1.66
PTCH1-219ENST00000549678 CHAC1Q9BUX1 264 aa4.7□□□□□ -1.66
PTCH1-219ENST00000549678 GEMIN7Q9H840 131 aaKnown RBP4.7□□□□□ -1.66
PTCH1-219ENST00000549678 PRSS2P07478 247 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 NDUFA6P56556 154 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 RAB5BP61020 215 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 SEC11AP67812 179 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 COX6A2Q02221 97 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 MAJINQ3KP22 176 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 OR10D4PQ8NGN7 298 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 CIRBP-AS1Q8TBR5 109 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 TOMM7Q9P0U1 55 aa4.69□□□□□ -1.66
PTCH1-219ENST00000549678 NDUFA1O15239 70 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 NPSP0C0P6 89 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 HERVK_113P63121 156 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 RPL18AQ02543 176 aaKnown RBP4.68□□□□□ -1.66
PTCH1-219ENST00000549678 ZC2HC1BQ5TFG8 222 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 ERASQ7Z444 233 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 CBLN2Q8IUK8 224 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 TOMM6Q96B49 74 aa4.68□□□□□ -1.66
PTCH1-219ENST00000549678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
PTCH1-219ENST00000549678 LOC107984640A0A0U1RRK4 108 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 IGIPA6NJ69 53 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.67□□□□□ -1.66
PTCH1-219ENST00000549678 SLPIP03973 132 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00614P0C842 121 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 UBE2D1P51668 147 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 GAGE2BQ13066 116 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00242Q5T6M2 205 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 Q6ZRU5 148 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 C18orf32Q8TCD1 76 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 C2orf48Q96LS8 159 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00474Q9P2X8 69 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
PTCH1-219ENST00000549678 A0A087WZ39 114 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 IGHV3OR16-9A0A0B4J2B5 98 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 HBDP02042 147 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 CKS1BP61024 79 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
PTCH1-219ENST00000549678 PMVKQ15126 192 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 STPG4Q8N801 248 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 C7orf33Q8WU49 177 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 AMELXQ99217 191 aa4.66□□□□□ -1.66
PTCH1-219ENST00000549678 A0A087WYN8 130 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 A0A096LNI7 61 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 A0A0J9YXV3 536 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 F8WDY8 70 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 J3QL48 77 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 HSBP1O75506 76 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 ATP5LO75964 103 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 PMCHL1Q16048 86 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 C6orf226Q5I0X4 101 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 LINC00173Q6ZV60 143 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 BAGE3Q86Y29 109 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 FAM104AQ969W3 186 aa4.65□□□□□ -1.67
PTCH1-219ENST00000549678 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
PTCH1-219ENST00000549678 H3BRM9 83 aa4.64□□□□□ -1.67
PTCH1-219ENST00000549678 PANO1I0J062 215 aa4.64□□□□□ -1.67
PTCH1-219ENST00000549678 ATP6V1G1O75348 118 aa4.64□□□□□ -1.67
PTCH1-219ENST00000549678 MRPL35Q9NZE8 188 aaKnown RBP4.64□□□□□ -1.67
PTCH1-219ENST00000549678 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 LINC01546A6NGU7 62 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 TRGC2P03986 189 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 PTTG1IPP53801 180 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 LINC01561Q8N1V8 128 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 CHCHD1Q96BP2 118 aaKnown RBP4.63□□□□□ -1.67
PTCH1-219ENST00000549678 CDKN2A-AS1Q9UH64 79 aa4.63□□□□□ -1.67
PTCH1-219ENST00000549678 TRBV30A0A0K0K1B3 111 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms