RNA–Protein interactions for RNA: ENST00000549400.1

PTPRB-207, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 4

Gene PTPRB, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-207ENST00000549400 ATP5EP2Q5VTU8 51 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 SFTA2Q6UW10 78 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 ATP11AUNQ6ZP68 121 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 Q86TA4 180 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 ORMDL3Q8N138 153 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 C20orf197Q8N268 126 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 TIMM21Q9BVV7 248 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 ESM1Q9NQ30 184 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
PTPRB-207ENST00000549400 USP9YO00507 2555 aaPredicted RBP2.83□□□□□ -1.96
PTPRB-207ENST00000549400 NBPF19A0A087WUL8 3843 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 ZANQ9Y493 2812 aa2.83□□□□□ -1.96
PTPRB-207ENST00000549400 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPRB-207ENST00000549400 CREBBPQ92793 2442 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 MXRA5Q9NR99 2828 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 A0A096LNT2 108 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 TRAV40A0A0B4J280 105 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 TRBV10-3A0A0K0K1G6 114 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 A0A1B0GUT8 65 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV3-30P01768 117 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 CTSGP08311 255 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV3-30-5P0DP03 117 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 FUSP35637 526 aaKnown RBP eCLIP2.82□□□□□ -1.96
PTPRB-207ENST00000549400 SEC61BP60468 96 aaKnown RBP2.82□□□□□ -1.96
PTPRB-207ENST00000549400 Q1RN00 199 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 ESRGQ1W209 222 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 MRPL51Q4U2R6 128 aaKnown RBP2.82□□□□□ -1.96
PTPRB-207ENST00000549400 LINC00242Q5T6M2 205 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 FAM19A3Q7Z5A8 133 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 NKAPP1Q8N9T2 125 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 MPLKIPQ8TAP9 179 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 SMCR5Q8TEV8 140 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 TMEM263Q8WUH6 116 aaKnown RBP2.82□□□□□ -1.96
PTPRB-207ENST00000549400 CNFNQ9BYD5 112 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 TTTY13Q9BZ97 58 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 BPESC1Q9GZL8 116 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 UBE2D4Q9Y2X8 147 aa2.82□□□□□ -1.96
PTPRB-207ENST00000549400 AKAP6Q13023 2319 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 TMEM223A0PJW6 202 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 CLPSL1A2RUU4 121 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 ZNF815PA8K554 130 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 H3BUA1 57 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 COX7A2LO14548 114 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 GNLYP22749 145 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 S100A4P26447 101 aaKnown RBP2.81□□□□□ -1.96
PTPRB-207ENST00000549400 UBE2AP49459 152 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 LINC00322Q6ZN03 302 aaPredicted RBP2.81□□□□□ -1.96
PTPRB-207ENST00000549400 C5orf56Q8N8D9 126 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 DIRC1Q969H9 104 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 FAM218AQ96MZ4 157 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 ARHGAP32A7KAX9 2087 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 WNK2Q9Y3S1 2297 aa2.81□□□□□ -1.96
PTPRB-207ENST00000549400 MAP1AP78559 2803 aaPredicted RBP2.8□□□□□ -1.96
PTPRB-207ENST00000549400 UTP20O75691 2785 aaKnown RBP2.8□□□□□ -1.96
PTPRB-207ENST00000549400 TENM4Q6N022 2769 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 MED13LQ71F56 2210 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV3OR16-9A0A0B4J2B5 98 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV1-69DA0A0B4J2H0 117 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV4-61A0A0C4DH41 118 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 LOC389332A0A1B0GUA5 103 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV1-69P01742 117 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV3-48P01763 117 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 PRSS2P07478 247 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 CRIP1P50238 77 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 DSCR9P59020 149 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 LYZP61626 148 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 PRB3Q04118 309 aaPredicted RBP2.8□□□□□ -1.96
PTPRB-207ENST00000549400 KIAA0087Q14695 138 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 SMAD5-AS1Q9Y6J3 95 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 APCP25054 2843 aa2.8□□□□□ -1.96
PTPRB-207ENST00000549400 NOTCH1P46531 2555 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 A0A0J9YY99 117 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 A6NDX4 124 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 F8VRH5 84 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 F8WEM9 126 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 ATP6V0E1O15342 81 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 ERC2-IT1O76042 136 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 GPHB5Q86YW7 130 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 LENEPQ9Y5L5 61 aa2.79□□□□□ -1.96
PTPRB-207ENST00000549400 PRRC2AP48634 2157 aaKnown RBP2.78□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV4-30-2A0A087WSY4 118 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 IGHV3-21A0A0B4J1V1 117 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 D6R8Y8 96 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 M0R3E3 92 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 SOCS3O14543 225 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 TRBV12-3P01733 135 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 MSMBP08118 114 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 APELAP0DMC3 54 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 COX6B1P14854 86 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 CD24P25063 80 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 LINC00313P59037 77 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 C15orf32Q32M92 178 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 ZNF843Q8N446 348 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 CHCHD10Q8WYQ3 142 aaPredicted RBP2.78□□□□□ -1.96
PTPRB-207ENST00000549400 USMG5Q96IX5 58 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 WWC2-AS2Q96NR7 200 aa2.78□□□□□ -1.96
PTPRB-207ENST00000549400 PHLDA3Q9Y5J5 127 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms