RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 KRTAP10-4P60372 401 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-212ENST00000549162 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
SCAF11-212ENST00000549162 NSD1Q96L73 2696 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-212ENST00000549162 H3BVH4 76 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 SPINK13Q1W4C9 94 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 MUC21Q5SSG8 566 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 Q6ZN92 141 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 USP9XQ93008 2570 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-212ENST00000549162 IGKV2D-26A0A0A0MRZ7 120 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 DEFA5Q01523 94 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 ENHOQ6UWT2 76 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 LINC00959A0A1B0GUT2 108 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 CKS2P33552 79 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 IFI27P40305 119 aaPredicted RBP3.2□□□□□ -1.9
SCAF11-212ENST00000549162 DEFB136Q30KP8 78 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 MAPK1IP1LQ8NDC0 245 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 ATP6V0E2Q8NHE4 81 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 DUX3Q96PT4 197 aa3.2□□□□□ -1.9
SCAF11-212ENST00000549162 TRAV8-3A0A0A6YYJ7 113 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 TRAV12-3A0A0B4J271 114 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 IGLL5B9A064 214 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 TNCP24821 2201 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 NUDT3O95989 172 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 IGKCP01834 107 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 CD164Q04900 197 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 Q6ZRP5 223 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 HSD52Q0P140 79 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 C15orf56Q8N910 161 aa3.19□□□□□ -1.9
SCAF11-212ENST00000549162 RIF1Q5UIP0 2472 aaKnown RBP3.19□□□□□ -1.9
SCAF11-212ENST00000549162 IGHV3-30P01768 117 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 IGHV3-30-5P0DP03 117 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 SPANXN1Q5VSR9 72 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 OR11H2Q8NH07 326 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 CSMD3Q7Z407 3707 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 AHCTF1Q8WYP5 2266 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 IGLV5-48A0A075B6I7 105 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 C4orf26Q17RF5 130 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 LINC00337Q8N6G1 96 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 KIAA1644Q3SXP7 199 aa3.18□□□□□ -1.9
SCAF11-212ENST00000549162 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 A0A0J9YY99 117 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 RPL28P46779 137 aaKnown RBP3.17□□□□□ -1.9
SCAF11-212ENST00000549162 PRB3Q04118 309 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-212ENST00000549162 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 LINC01587Q99440 93 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 KCNQ1DNQ9H478 68 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 LCE6AA0A183 80 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 H3BRM9 83 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 M0R2Z0 102 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 Q6ZQT7 251 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
SCAF11-212ENST00000549162 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 IGHV3OR16-8A0A075B7F1 116 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 IGHV3-21A0A0B4J1V1 117 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 A0A0J9YXV3 536 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 MYMXA0A1B0GTQ4 84 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 SNRPCP09234 159 aaKnown RBP3.17□□□□□ -1.9
SCAF11-212ENST00000549162 PFN2P35080 140 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 LINC00527Q9UJ94 153 aa3.17□□□□□ -1.9
SCAF11-212ENST00000549162 OCIAD2Q56VL3 154 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 TLN1Q9Y490 2541 aaKnown RBP3.16□□□□□ -1.9
SCAF11-212ENST00000549162 MUC21A0A0G2JKD1 596 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 MUC21A0A140T8X8 626 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 STPG4Q8N801 248 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 LINC00588Q9Y4M8 146 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 LRBAP50851 2863 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 GCN1Q92616 2671 aaKnown RBP3.16□□□□□ -1.9
SCAF11-212ENST00000549162 APOMO95445 188 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 RPL18AQ02543 176 aaKnown RBP3.16□□□□□ -1.9
SCAF11-212ENST00000549162 C6orf223Q8N319 242 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
SCAF11-212ENST00000549162 MXRA5Q9NR99 2828 aa3.16□□□□□ -1.9
SCAF11-212ENST00000549162 BCE1O60756 84 aa3.15□□□□□ -1.91
SCAF11-212ENST00000549162 GAS8-AS1O95177 125 aa3.15□□□□□ -1.91
SCAF11-212ENST00000549162 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.91
SCAF11-212ENST00000549162 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
SCAF11-212ENST00000549162 FAM229BQ4G0N7 80 aa3.15□□□□□ -1.91
SCAF11-212ENST00000549162 DSPP15924 2871 aaKnown RBP3.15□□□□□ -1.91
SCAF11-212ENST00000549162 PRSS1P07477 247 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 NDUFV3P56181 108 aaKnown RBP3.14□□□□□ -1.91
SCAF11-212ENST00000549162 RBX1P62877 108 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 Q6JHZ5 121 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 SPACA4Q8TDM5 124 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.14□□□□□ -1.91
SCAF11-212ENST00000549162 HERVK_113P61574 105 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 NDUFA6P56556 154 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 DAD1P61803 113 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 ESRGQ1W209 222 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 C9orf163Q8N9P6 203 aa3.14□□□□□ -1.91
SCAF11-212ENST00000549162 SCGB3A1Q96QR1 104 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms