RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.78
CHMP1A-206ENST00000549139 LRP2P98164 4655 aa10.14□□□□□ -0.79
CHMP1A-206ENST00000549139 PKHD1L1Q86WI1 4243 aa10.14□□□□□ -0.79
CHMP1A-206ENST00000549139 IGHV1-58A0A0C4DH39 117 aa10.13□□□□□ -0.79
CHMP1A-206ENST00000549139 LINC01546A6NGU7 62 aa10.13□□□□□ -0.79
CHMP1A-206ENST00000549139 SLPIP03973 132 aa10.13□□□□□ -0.79
CHMP1A-206ENST00000549139 NPSP0C0P6 89 aa10.13□□□□□ -0.79
CHMP1A-206ENST00000549139 SCXQ7RTU7 201 aa10.13□□□□□ -0.79
CHMP1A-206ENST00000549139 IGLV4-3A0A075B6K6 122 aa10.12□□□□□ -0.79
CHMP1A-206ENST00000549139 GVQW2A0A096LPI5 108 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-206ENST00000549139 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.12□□□□□ -0.79
CHMP1A-206ENST00000549139 TMEM141Q96I45 108 aa10.12□□□□□ -0.79
CHMP1A-206ENST00000549139 YPEL4Q96NS1 127 aa10.12□□□□□ -0.79
CHMP1A-206ENST00000549139 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
CHMP1A-206ENST00000549139 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
CHMP1A-206ENST00000549139 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
CHMP1A-206ENST00000549139 COX7A2LO14548 114 aa10.1□□□□□ -0.79
CHMP1A-206ENST00000549139 TOMM6Q96B49 74 aa10.1□□□□□ -0.79
CHMP1A-206ENST00000549139 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
CHMP1A-206ENST00000549139 LINC01549A6NIU2 74 aa10.09□□□□□ -0.79
CHMP1A-206ENST00000549139 MALP21145 153 aa10.09□□□□□ -0.79
CHMP1A-206ENST00000549139 TEX43Q6ZNM6 134 aa10.09□□□□□ -0.79
CHMP1A-206ENST00000549139 SDIM1Q6ZPB5 146 aa10.09□□□□□ -0.79
CHMP1A-206ENST00000549139 AMELXQ99217 191 aa10.09□□□□□ -0.79
CHMP1A-206ENST00000549139 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 Q6ZN92 141 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 FA2HQ7L5A8 372 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 C5orf38Q86SI9 138 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 VCX2Q9H322 139 aa10.08□□□□□ -0.8
CHMP1A-206ENST00000549139 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 APOMO95445 188 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 ERASQ7Z444 233 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 C2orf88Q9BSF0 95 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
CHMP1A-206ENST00000549139 UBE2D1P51668 147 aa10.06□□□□□ -0.8
CHMP1A-206ENST00000549139 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
CHMP1A-206ENST00000549139 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CHMP1A-206ENST00000549139 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
CHMP1A-206ENST00000549139 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
CHMP1A-206ENST00000549139 LINC00614P0C842 121 aa10.05□□□□□ -0.8
CHMP1A-206ENST00000549139 SCGB3A1Q96QR1 104 aa10.05□□□□□ -0.8
CHMP1A-206ENST00000549139 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
CHMP1A-206ENST00000549139 FAM19A3Q7Z5A8 133 aa10.04□□□□□ -0.8
CHMP1A-206ENST00000549139 LINC00526Q96FQ7 95 aa10.04□□□□□ -0.8
CHMP1A-206ENST00000549139 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 RAB5BP61020 215 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 COX6A2Q02221 97 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 OR10D4PQ8NGN7 298 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 URB1-AS1Q96HZ7 61 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 TNXBP22105 4242 aa10.03□□□□□ -0.8
CHMP1A-206ENST00000549139 A0A087WZ39 114 aa10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 MT1HL1P0DM35 61 aa10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 SYCNQ0VAF6 134 aa10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 CIRBPQ14011 172 aaKnown RBP10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 CARD19Q96LW7 228 aa10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
CHMP1A-206ENST00000549139 HNRNPA3P51991 378 aaKnown RBP10.01□□□□□ -0.81
CHMP1A-206ENST00000549139 SEC11AP67812 179 aa10.01□□□□□ -0.81
CHMP1A-206ENST00000549139 F8WDY8 70 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 PANO1I0J062 215 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 SPAG11BQ08648 103 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 CAMK2N2Q96S95 79 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
CHMP1A-206ENST00000549139 A0A096LNJ9 63 aa9.99□□□□□ -0.81
CHMP1A-206ENST00000549139 HERVK_113P63121 156 aa9.99□□□□□ -0.81
CHMP1A-206ENST00000549139 Q6ZRU5 148 aa9.99□□□□□ -0.81
CHMP1A-206ENST00000549139 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.98□□□□□ -0.81
CHMP1A-206ENST00000549139 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
CHMP1A-206ENST00000549139 COLCA2A8K830 154 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 HBDP02042 147 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 TRGC2P03986 189 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 PMVKQ15126 192 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 RNF151Q2KHN1 245 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 SPACA4Q8TDM5 124 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 CST9LQ9H4G1 147 aa9.97□□□□□ -0.81
CHMP1A-206ENST00000549139 A0A0J9YXV3 536 aa9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 CHTF8P0CG12 524 aa9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 KIAA0087Q14695 138 aa9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
CHMP1A-206ENST00000549139 A0A087WYN8 130 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 TINCRA0A1B0GVN0 87 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 NDUFA1O15239 70 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 PDZD11Q5EBL8 140 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 LINC00474Q9P2X8 69 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
CHMP1A-206ENST00000549139 A0A096LNI7 61 aa9.94□□□□□ -0.82
CHMP1A-206ENST00000549139 LOC107984640A0A0U1RRK4 108 aa9.94□□□□□ -0.82
CHMP1A-206ENST00000549139 PMCHL1Q16048 86 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms