RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 HIGD1BQ9P298 99 aa4.69□□□□□ -1.66
RNF41-204ENST00000548120 PYGO1Q9Y3Y4 419 aa4.69□□□□□ -1.66
RNF41-204ENST00000548120 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 TRBV10-1A0A0K0K1A3 114 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 E9PLD3 99 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
RNF41-204ENST00000548120 Q6ZVH6 145 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 NFE4Q86UQ8 179 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 C6orf223Q8N319 242 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 AMELXQ99217 191 aa4.68□□□□□ -1.66
RNF41-204ENST00000548120 TRBV25-1A0A075B6N4 114 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.67□□□□□ -1.66
RNF41-204ENST00000548120 TRAV8-6A0A0B4J262 113 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 GAGE12BA1L429 117 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 IGKV2-29A2NJV5 120 aaPredicted RBP4.67□□□□□ -1.66
RNF41-204ENST00000548120 TAX1BP3O14907 124 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 GAGE7O76087 117 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 NPSP0C0P6 89 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 GAGE12FP0CL80 117 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 GAGE12GP0CL81 117 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 GAGE12IP0CL82 117 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 ZNF25P17030 456 aaPredicted RBP4.67□□□□□ -1.66
RNF41-204ENST00000548120 EMP1P54849 157 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 UBE2D3P61077 147 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 UBE2D2P62837 147 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 COTL1Q14019 142 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 PAPPA-AS1Q5QFB9 102 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 LINC00612Q8N6U2 182 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 SLC25A29Q8N8R3 303 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 PRADC1Q9BSG0 188 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 SPANXA1Q9NS26 97 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 CELA1Q9UNI1 258 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 UBE2D4Q9Y2X8 147 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 COX11Q9Y6N1 276 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 X6R8D5 127 aa4.67□□□□□ -1.66
RNF41-204ENST00000548120 TRBV7-3A0A075B6L6 115 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 MYMXA0A1B0GTQ4 84 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 CIDEAO60543 219 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 LINC00694P0DN24 101 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 ZNF22P17026 224 aaPredicted RBP4.66□□□□□ -1.66
RNF41-204ENST00000548120 CRYBA4P53673 196 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 XGP55808 180 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 TSPEAR-AS2P59090 65 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 HERVK_113P61574 105 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 SEC11AP67812 179 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 RPL36AP83881 106 aaKnown RBP4.66□□□□□ -1.66
RNF41-204ENST00000548120 LINC00469Q8N7U9 141 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 ORAOV1Q8WV07 137 aa4.66□□□□□ -1.66
RNF41-204ENST00000548120 RPL36ALQ969Q0 106 aaKnown RBP4.66□□□□□ -1.66
RNF41-204ENST00000548120 TRGV2A0A075B6R0 118 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 A0A0J9YXV3 536 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 LOC100131303A0A0U1RQF7 123 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 TMEM223A0PJW6 202 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 GAGE12JA6NER3 117 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 SMIM9A6NGZ8 99 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 MRPS36P82909 103 aaKnown RBP4.65□□□□□ -1.67
RNF41-204ENST00000548120 GAGE1Q13065 139 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 GAGE4Q13068 117 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 GAGE5Q13069 117 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 FHL2Q14192 279 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 C12orf74Q32Q52 190 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 GAGE13Q4V321 117 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 Q6ZUT4 128 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 DAZ4Q86SG3 579 aaKnown RBP4.65□□□□□ -1.67
RNF41-204ENST00000548120 PLEKHB2Q96CS7 222 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 TIMM21Q9BVV7 248 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 VCX2Q9H322 139 aa4.65□□□□□ -1.67
RNF41-204ENST00000548120 DAZ3Q9NR90 486 aaKnown RBP4.65□□□□□ -1.67
RNF41-204ENST00000548120 NBDYA0A0U1RRE5 68 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 TRBV6-4A0A1B0GX49 114 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 A6NDN8 102 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 ZNF815PA8K554 130 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
RNF41-204ENST00000548120 LEPROTO15243 131 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 MIFP14174 115 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 FUSP35637 526 aaKnown RBP eCLIP4.64□□□□□ -1.67
RNF41-204ENST00000548120 FXYD2P54710 66 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 TAL2Q16559 108 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 RNASE13Q5GAN3 156 aaKnown RBP4.64□□□□□ -1.67
RNF41-204ENST00000548120 TMEM170BQ5T4T1 132 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 NTM-AS1Q6ZSK4 140 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 CEND1Q8N111 149 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
RNF41-204ENST00000548120 TRGV4A0A0C4DH28 118 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 H3BRM9 83 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 K7EP13 123 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 GCSHP23434 173 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 UBE2D1P51668 147 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 HAMPP81172 84 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 OR5A1Q8NGJ0 315 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 TM2D2Q9BX73 214 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
RNF41-204ENST00000548120 LYRM9A8MSI8 78 aa4.62□□□□□ -1.67
RNF41-204ENST00000548120 J3QQQ9 107 aa4.62□□□□□ -1.67
RNF41-204ENST00000548120 TMEM243Q9BU79 118 aa4.62□□□□□ -1.67
RNF41-204ENST00000548120 IGHV3-64A0A075B6Q5 118 aa4.61□□□□□ -1.67
RNF41-204ENST00000548120 IGLV5-45A0A087WSX0 123 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms