RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 TRBV6-4A0A1B0GX49 114 aa7.71□□□□□ -1.18
SCN8A-205ENST00000548086 J3QR89 54 aa7.71□□□□□ -1.18
SCN8A-205ENST00000548086 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.18
SCN8A-205ENST00000548086 MRPS36P82909 103 aaKnown RBP7.71□□□□□ -1.18
SCN8A-205ENST00000548086 PRO0255Q9UI72 69 aa7.71□□□□□ -1.18
SCN8A-205ENST00000548086 DEFB131BA0A096LNP1 70 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 A0A096LPF7 62 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 TMEM238C9JI98 176 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 PAX4O43316 350 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 GYPEP15421 78 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 LYRM7Q5U5X0 104 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
SCN8A-205ENST00000548086 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
SCN8A-205ENST00000548086 A0A0B4J2C4 111 aa7.69□□□□□ -1.18
SCN8A-205ENST00000548086 CIDEAO60543 219 aa7.69□□□□□ -1.18
SCN8A-205ENST00000548086 LGALS3P17931 250 aaKnown RBP7.69□□□□□ -1.18
SCN8A-205ENST00000548086 TNFRSF18Q9Y5U5 241 aa7.69□□□□□ -1.18
SCN8A-205ENST00000548086 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 FOXI1Q12951 378 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 LITAFQ99732 161 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 PRO1854Q9UHT4 67 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 TRBV10-1A0A0K0K1A3 114 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 M0QXV9 152 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 APOMO95445 188 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 TCL1BO95988 128 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
SCN8A-205ENST00000548086 MTURNQ8N3F0 131 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
SCN8A-205ENST00000548086 LINC01600Q96MT4 127 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 VCX2Q9H322 139 aa7.68□□□□□ -1.18
SCN8A-205ENST00000548086 CHCHD7Q9BUK0 85 aa7.67□□□□□ -1.18
SCN8A-205ENST00000548086 CSMD3Q7Z407 3707 aa7.67□□□□□ -1.18
SCN8A-205ENST00000548086 TRAV10A0A0B4J240 114 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 A0A0J9YXY3 114 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 A4D1N5 150 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 IGHV3-33P01772 117 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 LINC00694P0DN24 101 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 SIGMAR1Q99720 223 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 IGHV3-30-3P0DP02 117 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 DNAJC30Q96LL9 226 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
SCN8A-205ENST00000548086 LOC107984156A0A0G2JMH3 177 aa7.65□□□□□ -1.18
SCN8A-205ENST00000548086 TEN1Q86WV5 123 aa7.65□□□□□ -1.18
SCN8A-205ENST00000548086 ARL17AQ8IVW1 177 aa7.65□□□□□ -1.18
SCN8A-205ENST00000548086 DNAH7Q8WXX0 4024 aa7.65□□□□□ -1.19
SCN8A-205ENST00000548086 IGHV1-58A0A0C4DH39 117 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 TINCRA0A1B0GVN0 87 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 PSMB2P49721 201 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 IGLV5-45A0A087WSX0 123 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 NTM-AS1Q6ZSK4 140 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 CARD19Q96LW7 228 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 TIMM21Q9BVV7 248 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 SPANXDQ9BXN6 97 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 GTSF1LQ9H1H1 148 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 CDIP1Q9H305 208 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 SPANXCQ9NY87 97 aa7.64□□□□□ -1.19
SCN8A-205ENST00000548086 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.63□□□□□ -1.19
SCN8A-205ENST00000548086 MUSTN1Q8IVN3 82 aa7.63□□□□□ -1.19
SCN8A-205ENST00000548086 ICOSQ9Y6W8 199 aa7.63□□□□□ -1.19
SCN8A-205ENST00000548086 MRPL23Q16540 153 aaKnown RBP7.62□□□□□ -1.19
SCN8A-205ENST00000548086 ZFAND6Q6FIF0 208 aa7.62□□□□□ -1.19
SCN8A-205ENST00000548086 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
SCN8A-205ENST00000548086 PPDPFLQ8WWR9 84 aa7.62□□□□□ -1.19
SCN8A-205ENST00000548086 STARD9Q9P2P6 4700 aa7.62□□□□□ -1.19
SCN8A-205ENST00000548086 SFTA2Q6UW10 78 aa7.62□□□□□ -1.19
SCN8A-205ENST00000548086 FAM19A3Q7Z5A8 133 aa7.62□□□□□ -1.19
SCN8A-205ENST00000548086 DAZ4Q86SG3 579 aaKnown RBP7.62□□□□□ -1.19
SCN8A-205ENST00000548086 DAZ3Q9NR90 486 aaKnown RBP7.62□□□□□ -1.19
SCN8A-205ENST00000548086 IGHV3-64A0A075B6Q5 118 aa7.61□□□□□ -1.19
SCN8A-205ENST00000548086 TRAV8-3A0A0A6YYJ7 113 aa7.61□□□□□ -1.19
SCN8A-205ENST00000548086 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 H3BNG1 76 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 TIMM17BO60830 172 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 SMAGPQ0VAQ4 97 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 Q6ZUT4 128 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.6□□□□□ -1.19
SCN8A-205ENST00000548086 IGKV2-29A2NJV5 120 aaPredicted RBP7.6□□□□□ -1.19
SCN8A-205ENST00000548086 TIRAPP58753 221 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 ADAMTSL4-AS1Q5T5F5 129 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 LYSTQ99698 3801 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 ERG28Q9UKR5 140 aa7.6□□□□□ -1.19
SCN8A-205ENST00000548086 MIAQ16674 131 aa7.59□□□□□ -1.19
SCN8A-205ENST00000548086 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
SCN8A-205ENST00000548086 TRBV6-8A0A0A6YYG3 113 aa7.59□□□□□ -1.2
SCN8A-205ENST00000548086 ESRGQ1W209 222 aa7.59□□□□□ -1.2
SCN8A-205ENST00000548086 LYPD5Q6UWN5 251 aa7.59□□□□□ -1.2
SCN8A-205ENST00000548086 ANKRD29Q8N6D5 301 aa7.59□□□□□ -1.2
SCN8A-205ENST00000548086 DYNC2H1Q8NCM8 4307 aaKnown RBP7.58□□□□□ -1.2
SCN8A-205ENST00000548086 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
SCN8A-205ENST00000548086 SLC25A20O43772 301 aa7.58□□□□□ -1.2
SCN8A-205ENST00000548086 RNASE13Q5GAN3 156 aaKnown RBP7.58□□□□□ -1.2
SCN8A-205ENST00000548086 Q8N3U1 123 aa7.58□□□□□ -1.2
SCN8A-205ENST00000548086 SVIPQ8NHG7 77 aa7.58□□□□□ -1.2
SCN8A-205ENST00000548086 CSDC2Q9Y534 153 aaKnown RBP7.58□□□□□ -1.2
SCN8A-205ENST00000548086 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
SCN8A-205ENST00000548086 NUPR2A6NF83 97 aa7.57□□□□□ -1.2
SCN8A-205ENST00000548086 NDUFA1O15239 70 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms