RNA–Protein interactions for RNA: ENST00000547856.5

RAPGEF3-216, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,659 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-216ENST00000547856 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 RPL36ALQ969Q0 106 aaKnown RBP10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 XCL2Q9UBD3 114 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 MOB4Q9Y3A3 225 aa10.25□□□□□ -0.77
RAPGEF3-216ENST00000547856 C19orf54Q5BKX5 351 aa10.24□□□□□ -0.77
RAPGEF3-216ENST00000547856 TOMM7Q9P0U1 55 aa10.24□□□□□ -0.77
RAPGEF3-216ENST00000547856 IGSF10Q6WRI0 2623 aa10.24□□□□□ -0.77
RAPGEF3-216ENST00000547856 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
RAPGEF3-216ENST00000547856 SNRPD3P62318 126 aaKnown RBP10.23□□□□□ -0.77
RAPGEF3-216ENST00000547856 CACNA1AO00555 2505 aa10.23□□□□□ -0.77
RAPGEF3-216ENST00000547856 RNASE1P07998 156 aaKnown RBP10.22□□□□□ -0.77
RAPGEF3-216ENST00000547856 BLCAPP62952 87 aa10.22□□□□□ -0.77
RAPGEF3-216ENST00000547856 OBSCN-AS1Q96MR7 158 aa10.22□□□□□ -0.77
RAPGEF3-216ENST00000547856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.21□□□□□ -0.77
RAPGEF3-216ENST00000547856 A0A0U1RQV1 116 aa10.21□□□□□ -0.77
RAPGEF3-216ENST00000547856 LINC00158P58513 81 aa10.21□□□□□ -0.77
RAPGEF3-216ENST00000547856 SNURFQ9Y675 71 aa10.21□□□□□ -0.77
RAPGEF3-216ENST00000547856 USP9XQ93008 2570 aaPredicted RBP10.21□□□□□ -0.78
RAPGEF3-216ENST00000547856 USMG5Q96IX5 58 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 Q96MF0 132 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 CSMD2Q7Z408 3487 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 OVOL2Q9BRP0 275 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 CREBBPQ92793 2442 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 CCKP06307 115 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 SERP1Q9Y6X1 66 aa10.2□□□□□ -0.78
RAPGEF3-216ENST00000547856 CFHR3Q02985 330 aa10.19□□□□□ -0.78
RAPGEF3-216ENST00000547856 IGHV4-61A0A0C4DH41 118 aa10.19□□□□□ -0.78
RAPGEF3-216ENST00000547856 H7BZZ5 65 aa10.19□□□□□ -0.78
RAPGEF3-216ENST00000547856 PF4P02776 101 aa10.19□□□□□ -0.78
RAPGEF3-216ENST00000547856 ORMDL1Q9P0S3 153 aa10.19□□□□□ -0.78
RAPGEF3-216ENST00000547856 SS18Q15532 418 aa10.18□□□□□ -0.78
RAPGEF3-216ENST00000547856 C2CD3Q4AC94 2353 aa10.18□□□□□ -0.78
RAPGEF3-216ENST00000547856 H0YGX0 51 aa10.18□□□□□ -0.78
RAPGEF3-216ENST00000547856 PAX4O43316 350 aa10.18□□□□□ -0.78
RAPGEF3-216ENST00000547856 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
RAPGEF3-216ENST00000547856 AVPP01185 164 aa10.17□□□□□ -0.78
RAPGEF3-216ENST00000547856 RMI2Q96E14 147 aa10.17□□□□□ -0.78
RAPGEF3-216ENST00000547856 LYPD5Q6UWN5 251 aa10.17□□□□□ -0.78
RAPGEF3-216ENST00000547856 FP248Q71RG6 208 aaPredicted RBP10.17□□□□□ -0.78
RAPGEF3-216ENST00000547856 DOPEY1Q5JWR5 2465 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 CCL18P55774 89 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 BRK1Q8WUW1 75 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 K7EQG2 157 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 PSMB8P28062 276 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 TMEM86BQ8N661 226 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 C11orf72Q8NBR9 251 aa10.16□□□□□ -0.78
RAPGEF3-216ENST00000547856 MYO18BQ8IUG5 2567 aa10.15□□□□□ -0.78
RAPGEF3-216ENST00000547856 Q6ZTI0 123 aa10.15□□□□□ -0.78
RAPGEF3-216ENST00000547856 C10orf99Q6UWK7 81 aa10.15□□□□□ -0.78
RAPGEF3-216ENST00000547856 C16orf95Q9H693 158 aa10.15□□□□□ -0.78
RAPGEF3-216ENST00000547856 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 H3BUX3 64 aa10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 IGHV3-53P01767 116 aa10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 S100A7L2Q5SY68 101 aa10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 CCL19Q99731 98 aa10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 C11orf68Q9H3H3 251 aaKnown RBP10.14□□□□□ -0.79
RAPGEF3-216ENST00000547856 ACACBO00763 2458 aa10.13□□□□□ -0.79
RAPGEF3-216ENST00000547856 F8WEM9 126 aa10.13□□□□□ -0.79
RAPGEF3-216ENST00000547856 K7EMT4 169 aa10.13□□□□□ -0.79
RAPGEF3-216ENST00000547856 IGHV4-30-2A0A087WSY4 118 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 F8WDY8 70 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 CENPEQ02224 2701 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 TRAV10A0A0B4J240 114 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 UBL5Q9BZL1 73 aa10.12□□□□□ -0.79
RAPGEF3-216ENST00000547856 EPM2AB3EWF7 344 aa10.11□□□□□ -0.79
RAPGEF3-216ENST00000547856 DEFB131AP59861 70 aa10.11□□□□□ -0.79
RAPGEF3-216ENST00000547856 NTM-AS1Q6ZSK4 140 aa10.11□□□□□ -0.79
RAPGEF3-216ENST00000547856 CSPG4Q6UVK1 2322 aa10.11□□□□□ -0.79
RAPGEF3-216ENST00000547856 ZANQ9Y493 2812 aa10.11□□□□□ -0.79
RAPGEF3-216ENST00000547856 CDC42SE2Q9NRR3 84 aa10.1□□□□□ -0.79
RAPGEF3-216ENST00000547856 SMIM26A0A096LP01 95 aa10.1□□□□□ -0.79
RAPGEF3-216ENST00000547856 ZFYVE26Q68DK2 2539 aa10.1□□□□□ -0.79
RAPGEF3-216ENST00000547856 HAMPP81172 84 aa10.1□□□□□ -0.79
RAPGEF3-216ENST00000547856 PRR3P79522 188 aaKnown RBP10.09□□□□□ -0.79
RAPGEF3-216ENST00000547856 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
RAPGEF3-216ENST00000547856 IGLV1-40P01703 118 aa10.09□□□□□ -0.79
RAPGEF3-216ENST00000547856 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
RAPGEF3-216ENST00000547856 H3BUA1 57 aa10.08□□□□□ -0.8
RAPGEF3-216ENST00000547856 TRBV7-6A0A0J9YX20 115 aa10.08□□□□□ -0.8
RAPGEF3-216ENST00000547856 MPLKIPQ8TAP9 179 aa10.08□□□□□ -0.8
RAPGEF3-216ENST00000547856 FBN2P35556 2912 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 POLQO75417 2590 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 PRB1P04280 392 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 SEC61GP60059 68 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 USP9YO00507 2555 aaPredicted RBP10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 JMJD7-PLA2G4BH0Y9G9 81 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 UBE2L6O14933 153 aa10.07□□□□□ -0.8
RAPGEF3-216ENST00000547856 A6NDX4 124 aa10.06□□□□□ -0.8
RAPGEF3-216ENST00000547856 MSMBP08118 114 aa10.06□□□□□ -0.8
RAPGEF3-216ENST00000547856 C1orf195Q5TG92 126 aa10.06□□□□□ -0.8
RAPGEF3-216ENST00000547856 ANKRD17O75179 2603 aaKnown RBP10.06□□□□□ -0.8
RAPGEF3-216ENST00000547856 M0R2N4 97 aa10.05□□□□□ -0.8
RAPGEF3-216ENST00000547856 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
RAPGEF3-216ENST00000547856 V9GYY9 64 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms