RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 POLR2KP53803 58 aaKnown RBP4.9□□□□□ -1.63
PTCH1-214ENST00000547615 LBHQ53QV2 105 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-214ENST00000547615 TYMSOSQ8TAI1 123 aa4.9□□□□□ -1.63
PTCH1-214ENST00000547615 PACRGQ96M98 296 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-214ENST00000547615 OPRPNQ99935 248 aaPredicted RBP4.9□□□□□ -1.63
PTCH1-214ENST00000547615 TMEM191AQ9H0A3 160 aa4.9□□□□□ -1.63
PTCH1-214ENST00000547615 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
PTCH1-214ENST00000547615 TGIF2-C20orf24A0A0A6YYL0 155 aa4.89□□□□□ -1.63
PTCH1-214ENST00000547615 HMSDA8MTL9 139 aa4.89□□□□□ -1.63
PTCH1-214ENST00000547615 NDUFC2-KCTD14E9PQ53 114 aa4.89□□□□□ -1.63
PTCH1-214ENST00000547615 C5orf38Q86SI9 138 aa4.89□□□□□ -1.63
PTCH1-214ENST00000547615 A0A1B0GUT8 65 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 GATCO43716 136 aaKnown RBP4.88□□□□□ -1.63
PTCH1-214ENST00000547615 TSPAN13O95857 204 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 FOXA3P55318 350 aaPredicted RBP4.88□□□□□ -1.63
PTCH1-214ENST00000547615 SUMO2P61956 95 aaKnown RBP4.88□□□□□ -1.63
PTCH1-214ENST00000547615 GAGE2EQ4V326 116 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 FAM231DQ6ZW35 169 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 GAGE2DQ9UEU5 116 aa4.88□□□□□ -1.63
PTCH1-214ENST00000547615 TRBV20OR9-2A0A075B6H5 130 aa4.87□□□□□ -1.63
PTCH1-214ENST00000547615 IGHV3OR16-9A0A0B4J2B5 98 aa4.87□□□□□ -1.63
PTCH1-214ENST00000547615 HBBP68871 147 aa4.87□□□□□ -1.63
PTCH1-214ENST00000547615 TCTE3Q8IZS6 198 aa4.87□□□□□ -1.63
PTCH1-214ENST00000547615 RNASE7Q9H1E1 156 aaKnown RBP4.87□□□□□ -1.63
PTCH1-214ENST00000547615 TP73-AS1Q9UF72 201 aa4.87□□□□□ -1.63
PTCH1-214ENST00000547615 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
PTCH1-214ENST00000547615 MRPS36P82909 103 aaKnown RBP4.86□□□□□ -1.63
PTCH1-214ENST00000547615 FAM229BQ4G0N7 80 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 LINC01561Q8N1V8 128 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 C20orf78Q9BR46 151 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 C6orf48Q9UBA6 75 aa4.86□□□□□ -1.63
PTCH1-214ENST00000547615 TMEM250H0YL14 139 aa4.85□□□□□ -1.63
PTCH1-214ENST00000547615 RAB4AP20338 218 aa4.85□□□□□ -1.63
PTCH1-214ENST00000547615 RPL32P62910 135 aaKnown RBP4.85□□□□□ -1.63
PTCH1-214ENST00000547615 RIGQ13278 110 aa4.85□□□□□ -1.63
PTCH1-214ENST00000547615 Q6ZUT4 128 aa4.85□□□□□ -1.63
PTCH1-214ENST00000547615 IFITM10A6NMD0 228 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 BCE1O60756 84 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 PRSS2P07478 247 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 IFI27P40305 119 aaPredicted RBP4.84□□□□□ -1.63
PTCH1-214ENST00000547615 UNQ6190/PRO20217Q6UXQ8 127 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 OCC1Q8TAD7 63 aa4.84□□□□□ -1.63
PTCH1-214ENST00000547615 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 A0A1B0GW15 77 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 HIGD1CA8MV81 97 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 K7EN84 100 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 RNASE13Q5GAN3 156 aaKnown RBP4.83□□□□□ -1.64
PTCH1-214ENST00000547615 KRTAP11-1Q8IUC1 163 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 CTDSP1Q9GZU7 261 aa4.83□□□□□ -1.64
PTCH1-214ENST00000547615 TRBV24-1A0A075B6N3 115 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 A0A087X002 238 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 IGKV2D-26A0A0A0MRZ7 120 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 ZNF727A8MUV8 499 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 S100A8P05109 93 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 CXCL5P42830 114 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 CKS1BP61024 79 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 C10orf25Q5T742 122 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 SPAG11AQ6PDA7 123 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 FP248Q71RG6 208 aaPredicted RBP4.82□□□□□ -1.64
PTCH1-214ENST00000547615 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
PTCH1-214ENST00000547615 AMN1Q8IY45 258 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 C2orf88Q9BSF0 95 aa4.82□□□□□ -1.64
PTCH1-214ENST00000547615 C9orf129Q5T035 196 aaKnown RBP4.81□□□□□ -1.64
PTCH1-214ENST00000547615 LCE2CQ5TA81 110 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 Q6ZN92 141 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 NRACQ8N912 160 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 CRCT1Q9UGL9 99 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 C22orf24Q9Y442 160 aa4.81□□□□□ -1.64
PTCH1-214ENST00000547615 NPSP0C0P6 89 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 UBE2AP49459 152 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 SEC11AP67812 179 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 KIAA0087Q14695 138 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 CLLU1Q5K131 121 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 KRTAP7-1Q8IUC3 87 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 Q8IZM0 81 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 LINC00337Q8N6G1 96 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 OSTCQ9NRP0 149 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 NAT8BQ9UHF3 227 aa4.8□□□□□ -1.64
PTCH1-214ENST00000547615 TMA7Q9Y2S6 64 aaKnown RBP4.8□□□□□ -1.64
PTCH1-214ENST00000547615 F8W036 122 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 PPBPP02775 128 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 RAB5AP20339 215 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 CKS2P33552 79 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 SEC61BP60468 96 aaKnown RBP4.79□□□□□ -1.64
PTCH1-214ENST00000547615 S100A12P80511 92 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 C6orf226Q5I0X4 101 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 FAM104BQ5XKR9 115 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 TMEM141Q96I45 108 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 SMIM2Q9BVW6 85 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 PPDPFQ9H3Y8 114 aa4.79□□□□□ -1.64
PTCH1-214ENST00000547615 F8VRH5 84 aa4.78□□□□□ -1.64
PTCH1-214ENST00000547615 RPL39P62891 51 aaKnown RBP4.78□□□□□ -1.64
PTCH1-214ENST00000547615 PAPPA-AS1Q5QFB9 102 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms