RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
CPSF6-204ENST00000547486 SMDT1Q9H4I9 107 aa8.26□□□□□ -1.09
CPSF6-204ENST00000547486 HBBP68871 147 aa8.25□□□□□ -1.09
CPSF6-204ENST00000547486 Q6ZRP5 223 aa8.25□□□□□ -1.09
CPSF6-204ENST00000547486 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
CPSF6-204ENST00000547486 F8W036 122 aa8.24□□□□□ -1.09
CPSF6-204ENST00000547486 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
CPSF6-204ENST00000547486 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
CPSF6-204ENST00000547486 S100A8P05109 93 aa8.23□□□□□ -1.09
CPSF6-204ENST00000547486 MRPS36P82909 103 aaKnown RBP8.23□□□□□ -1.09
CPSF6-204ENST00000547486 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
CPSF6-204ENST00000547486 SPANXA1Q9NS26 97 aa8.23□□□□□ -1.09
CPSF6-204ENST00000547486 PPBPP02775 128 aa8.22□□□□□ -1.09
CPSF6-204ENST00000547486 C10orf25Q5T742 122 aa8.22□□□□□ -1.09
CPSF6-204ENST00000547486 OR10D4PQ8NGN7 298 aa8.22□□□□□ -1.09
CPSF6-204ENST00000547486 ORAOV1Q8WV07 137 aa8.22□□□□□ -1.09
CPSF6-204ENST00000547486 LRP2P98164 4655 aa8.21□□□□□ -1.09
CPSF6-204ENST00000547486 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
CPSF6-204ENST00000547486 RNF151Q2KHN1 245 aa8.21□□□□□ -1.1
CPSF6-204ENST00000547486 TMEM136Q6ZRR5 245 aa8.21□□□□□ -1.1
CPSF6-204ENST00000547486 PRELID3AQ96N28 172 aa8.21□□□□□ -1.1
CPSF6-204ENST00000547486 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
CPSF6-204ENST00000547486 REG3GQ6UW15 175 aa8.2□□□□□ -1.1
CPSF6-204ENST00000547486 UNQ6190/PRO20217Q6UXQ8 127 aa8.2□□□□□ -1.1
CPSF6-204ENST00000547486 PHF5AQ7RTV0 110 aaKnown RBP8.2□□□□□ -1.1
CPSF6-204ENST00000547486 ORMDL3Q8N138 153 aa8.2□□□□□ -1.1
CPSF6-204ENST00000547486 MRPL35Q9NZE8 188 aaKnown RBP8.2□□□□□ -1.1
CPSF6-204ENST00000547486 PSORS1C2Q9UIG4 136 aa8.2□□□□□ -1.1
CPSF6-204ENST00000547486 RAB5AP20339 215 aa8.19□□□□□ -1.1
CPSF6-204ENST00000547486 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
CPSF6-204ENST00000547486 IGLV4-3A0A075B6K6 122 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 FAM168BA1KXE4 195 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 PRSS47A8MTI9 375 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 KIAA0087Q14695 138 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 LINC00242Q5T6M2 205 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 KRTAP11-1Q8IUC1 163 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
CPSF6-204ENST00000547486 F8WDY8 70 aa8.17□□□□□ -1.1
CPSF6-204ENST00000547486 NDUFA1O15239 70 aa8.17□□□□□ -1.1
CPSF6-204ENST00000547486 IFI27P40305 119 aaPredicted RBP8.17□□□□□ -1.1
CPSF6-204ENST00000547486 A0A087WZ39 114 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 MT-ND6P03923 174 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 C1orf137Q5JT78 98 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 ZC2HC1BQ5TFG8 222 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 RNF213Q63HN8 5207 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 KRTAP7-1Q8IUC3 87 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 IMMP2LQ96T52 175 aa8.16□□□□□ -1.1
CPSF6-204ENST00000547486 TMEM141Q96I45 108 aa8.15□□□□□ -1.1
CPSF6-204ENST00000547486 TGIF2-C20orf24A0A0A6YYL0 155 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 UBE2D1P51668 147 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 C2orf82Q6UX34 121 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 Q8N8P6 123 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
CPSF6-204ENST00000547486 MT-ND4LP03901 98 aa8.13□□□□□ -1.11
CPSF6-204ENST00000547486 PNRC1Q12796 327 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-204ENST00000547486 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
CPSF6-204ENST00000547486 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
CPSF6-204ENST00000547486 MAP1LC3AQ9H492 121 aa8.13□□□□□ -1.11
CPSF6-204ENST00000547486 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
CPSF6-204ENST00000547486 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
CPSF6-204ENST00000547486 IGLV7-43P04211 117 aa8.12□□□□□ -1.11
CPSF6-204ENST00000547486 C2orf66Q6UXQ4 117 aa8.12□□□□□ -1.11
CPSF6-204ENST00000547486 TEX43Q6ZNM6 134 aa8.12□□□□□ -1.11
CPSF6-204ENST00000547486 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
CPSF6-204ENST00000547486 AMELXQ99217 191 aa8.12□□□□□ -1.11
CPSF6-204ENST00000547486 CYSLTR1Q9Y271 337 aa8.11□□□□□ -1.11
CPSF6-204ENST00000547486 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
CPSF6-204ENST00000547486 VCX2Q9H322 139 aa8.1□□□□□ -1.11
CPSF6-204ENST00000547486 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
CPSF6-204ENST00000547486 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
CPSF6-204ENST00000547486 RAB14P61106 215 aa8.09□□□□□ -1.11
CPSF6-204ENST00000547486 LINC01561Q8N1V8 128 aa8.09□□□□□ -1.11
CPSF6-204ENST00000547486 C2orf88Q9BSF0 95 aa8.09□□□□□ -1.11
CPSF6-204ENST00000547486 ORMDL2Q53FV1 153 aa8.08□□□□□ -1.12
CPSF6-204ENST00000547486 Q6ZN92 141 aa8.08□□□□□ -1.12
CPSF6-204ENST00000547486 FAM19A3Q7Z5A8 133 aa8.08□□□□□ -1.12
CPSF6-204ENST00000547486 PRR26Q8N8Z3 221 aa8.08□□□□□ -1.12
CPSF6-204ENST00000547486 M0QXV9 152 aa8.07□□□□□ -1.12
CPSF6-204ENST00000547486 NPSP0C0P6 89 aa8.07□□□□□ -1.12
CPSF6-204ENST00000547486 KIAA1644Q3SXP7 199 aa8.07□□□□□ -1.12
CPSF6-204ENST00000547486 DIRC1Q969H9 104 aa8.07□□□□□ -1.12
CPSF6-204ENST00000547486 PACRGQ96M98 296 aaPredicted RBP8.07□□□□□ -1.12
CPSF6-204ENST00000547486 CTDSP1Q9GZU7 261 aa8.07□□□□□ -1.12
CPSF6-204ENST00000547486 H0Y9J4 135 aa8.06□□□□□ -1.12
CPSF6-204ENST00000547486 K7EMI3 77 aa8.06□□□□□ -1.12
CPSF6-204ENST00000547486 NXT2Q9NPJ8 142 aaKnown RBP8.06□□□□□ -1.12
CPSF6-204ENST00000547486 TOMM7Q9P0U1 55 aa8.06□□□□□ -1.12
CPSF6-204ENST00000547486 CDKN2A-AS1Q9UH64 79 aa8.06□□□□□ -1.12
CPSF6-204ENST00000547486 ADCYAP1P18509 176 aa8.05□□□□□ -1.12
CPSF6-204ENST00000547486 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
CPSF6-204ENST00000547486 CLLU1Q5K131 121 aa8.05□□□□□ -1.12
CPSF6-204ENST00000547486 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
CPSF6-204ENST00000547486 PRSS2P07478 247 aa8.04□□□□□ -1.12
CPSF6-204ENST00000547486 KRTAP1-4P0C5Y4 121 aa8.04□□□□□ -1.12
CPSF6-204ENST00000547486 CKS1BP61024 79 aa8.04□□□□□ -1.12
CPSF6-204ENST00000547486 UBE2BP63146 152 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms