RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 LINC00528Q8N1L1 170 aa15.46■□□□□ 0.07
RBFOX1-209ENST00000547427 DPH3Q96FX2 82 aa15.46■□□□□ 0.07
RBFOX1-209ENST00000547427 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.45■□□□□ 0.06
RBFOX1-209ENST00000547427 C2orf88Q9BSF0 95 aa15.44■□□□□ 0.06
RBFOX1-209ENST00000547427 ABCA13Q86UQ4 5058 aa15.43■□□□□ 0.06
RBFOX1-209ENST00000547427 TRAPPC1Q9Y5R8 145 aa15.43■□□□□ 0.06
RBFOX1-209ENST00000547427 PLA2G1BP04054 148 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-209ENST00000547427 COX6A2Q02221 97 aa15.42■□□□□ 0.06
RBFOX1-209ENST00000547427 CARD19Q96LW7 228 aa15.42■□□□□ 0.06
RBFOX1-209ENST00000547427 VCX2Q9H322 139 aa15.42■□□□□ 0.06
RBFOX1-209ENST00000547427 IGLV4-69A0A075B6H9 119 aa15.41■□□□□ 0.06
RBFOX1-209ENST00000547427 PANO1I0J062 215 aa15.41■□□□□ 0.06
RBFOX1-209ENST00000547427 INAFM2P0DMQ5 153 aa15.41■□□□□ 0.06
RBFOX1-209ENST00000547427 SYCNQ0VAF6 134 aa15.41■□□□□ 0.06
RBFOX1-209ENST00000547427 IGHV3OR16-9A0A0B4J2B5 98 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 NPSP0C0P6 89 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 PAPPA-AS1Q5QFB9 102 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 FA2HQ7L5A8 372 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 TOMM6Q96B49 74 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 SMCO4Q9NRQ5 59 aa15.4■□□□□ 0.06
RBFOX1-209ENST00000547427 IGIPA6NJ69 53 aa15.39■□□□□ 0.05
RBFOX1-209ENST00000547427 CHTF8P0CG12 524 aa15.39■□□□□ 0.05
RBFOX1-209ENST00000547427 PKIGQ9Y2B9 76 aa15.39■□□□□ 0.05
RBFOX1-209ENST00000547427 ZC2HC1BQ5TFG8 222 aa15.38■□□□□ 0.05
RBFOX1-209ENST00000547427 OR10D4PQ8NGN7 298 aa15.38■□□□□ 0.05
RBFOX1-209ENST00000547427 CAMK2N2Q96S95 79 aa15.38■□□□□ 0.05
RBFOX1-209ENST00000547427 SPAG11BQ08648 103 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 CIRBPQ14011 172 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 LINC00242Q5T6M2 205 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 ORAOV1Q8WV07 137 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 SCGB3A1Q96QR1 104 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 AMELXQ99217 191 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 TIMM17AQ99595 171 aa15.37■□□□□ 0.05
RBFOX1-209ENST00000547427 IGKV2-24A0A0C4DH68 120 aa15.36■□□□□ 0.05
RBFOX1-209ENST00000547427 UBE2D1P51668 147 aa15.36■□□□□ 0.05
RBFOX1-209ENST00000547427 FAT1Q14517 4588 aa15.36■□□□□ 0.05
RBFOX1-209ENST00000547427 LINC01546A6NGU7 62 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 LINC01549A6NIU2 74 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 LINC00173Q6ZV60 143 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 ERASQ7Z444 233 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 SLC7A5P1Q8MH63 180 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 SPACA4Q8TDM5 124 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 C2orf48Q96LS8 159 aa15.35■□□□□ 0.05
RBFOX1-209ENST00000547427 MAJINQ3KP22 176 aa15.34■□□□□ 0.05
RBFOX1-209ENST00000547427 Q6ZRU5 148 aa15.34■□□□□ 0.05
RBFOX1-209ENST00000547427 A0A087WYN8 130 aa15.33■□□□□ 0.04
RBFOX1-209ENST00000547427 A0A087WZ39 114 aa15.33■□□□□ 0.04
RBFOX1-209ENST00000547427 A0A096LNI7 61 aa15.31■□□□□ 0.04
RBFOX1-209ENST00000547427 C18orf32Q8TCD1 76 aa15.31■□□□□ 0.04
RBFOX1-209ENST00000547427 SEC11AP67812 179 aa15.3■□□□□ 0.04
RBFOX1-209ENST00000547427 LINC00474Q9P2X8 69 aa15.3■□□□□ 0.04
RBFOX1-209ENST00000547427 LOC107984640A0A0U1RRK4 108 aa15.29■□□□□ 0.04
RBFOX1-209ENST00000547427 CBLN2Q8IUK8 224 aa15.29■□□□□ 0.04
RBFOX1-209ENST00000547427 SRRM2Q9UQ35 2752 aaKnown RBP15.29■□□□□ 0.04
RBFOX1-209ENST00000547427 F8WDY8 70 aa15.28■□□□□ 0.04
RBFOX1-209ENST00000547427 NDUFA1O15239 70 aa15.28■□□□□ 0.04
RBFOX1-209ENST00000547427 STPG4Q8N801 248 aa15.28■□□□□ 0.04
RBFOX1-209ENST00000547427 YPEL4Q96NS1 127 aa15.28■□□□□ 0.04
RBFOX1-209ENST00000547427 GEMIN7Q9H840 131 aaKnown RBP15.28■□□□□ 0.04
RBFOX1-209ENST00000547427 LINC00614P0C842 121 aa15.27■□□□□ 0.04
RBFOX1-209ENST00000547427 RPL37AP61513 92 aaKnown RBP15.27■□□□□ 0.04
RBFOX1-209ENST00000547427 HERVK_113P63121 156 aa15.27■□□□□ 0.04
RBFOX1-209ENST00000547427 FAM19A3Q7Z5A8 133 aa15.27■□□□□ 0.04
RBFOX1-209ENST00000547427 PLAC8Q9NZF1 115 aa15.27■□□□□ 0.04
RBFOX1-209ENST00000547427 VPS13BQ7Z7G8 4022 aa15.27■□□□□ 0.03
RBFOX1-209ENST00000547427 RAB5BP61020 215 aa15.26■□□□□ 0.03
RBFOX1-209ENST00000547427 GAGE2BQ13066 116 aa15.26■□□□□ 0.03
RBFOX1-209ENST00000547427 LINC01561Q8N1V8 128 aa15.26■□□□□ 0.03
RBFOX1-209ENST00000547427 A0A0J9YXV3 536 aa15.24■□□□□ 0.03
RBFOX1-209ENST00000547427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.24■□□□□ 0.03
RBFOX1-209ENST00000547427 RPL18AQ02543 176 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-209ENST00000547427 RNF151Q2KHN1 245 aa15.24■□□□□ 0.03
RBFOX1-209ENST00000547427 MRPL35Q9NZE8 188 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-209ENST00000547427 PTTG1IPP53801 180 aa15.23■□□□□ 0.03
RBFOX1-209ENST00000547427 URB1-AS1Q96HZ7 61 aa15.23■□□□□ 0.03
RBFOX1-209ENST00000547427 PACRGQ96M98 296 aaPredicted RBP15.23■□□□□ 0.03
RBFOX1-209ENST00000547427 PRSS2P07478 247 aa15.22■□□□□ 0.03
RBFOX1-209ENST00000547427 UNQ6190/PRO20217Q6UXQ8 127 aa15.22■□□□□ 0.03
RBFOX1-209ENST00000547427 TOMM7Q9P0U1 55 aa15.22■□□□□ 0.03
RBFOX1-209ENST00000547427 CDKN2A-AS1Q9UH64 79 aa15.22■□□□□ 0.03
RBFOX1-209ENST00000547427 HBDP02042 147 aa15.21■□□□□ 0.03
RBFOX1-209ENST00000547427 KIAA0087Q14695 138 aa15.21■□□□□ 0.03
RBFOX1-209ENST00000547427 PMVKQ15126 192 aa15.21■□□□□ 0.03
RBFOX1-209ENST00000547427 C7orf33Q8WU49 177 aa15.21■□□□□ 0.03
RBFOX1-209ENST00000547427 CST9LQ9H4G1 147 aa15.21■□□□□ 0.03
RBFOX1-209ENST00000547427 PMCHL1Q16048 86 aa15.2■□□□□ 0.02
RBFOX1-209ENST00000547427 C10orf25Q5T742 122 aa15.2■□□□□ 0.02
RBFOX1-209ENST00000547427 LINC00469Q8N7U9 141 aa15.2■□□□□ 0.02
RBFOX1-209ENST00000547427 TINCRA0A1B0GVN0 87 aa15.19■□□□□ 0.02
RBFOX1-209ENST00000547427 NDUFA6P56556 154 aa15.19■□□□□ 0.02
RBFOX1-209ENST00000547427 FLG2Q5D862 2391 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-209ENST00000547427 A0A096LNJ9 63 aa15.18■□□□□ 0.02
RBFOX1-209ENST00000547427 KRTAP10-4P60372 401 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-209ENST00000547427 C6orf226Q5I0X4 101 aa15.18■□□□□ 0.02
RBFOX1-209ENST00000547427 C2orf82Q6UX34 121 aa15.18■□□□□ 0.02
RBFOX1-209ENST00000547427 CKS1BP61024 79 aa15.17■□□□□ 0.02
RBFOX1-209ENST00000547427 C6orf48Q9UBA6 75 aa15.17■□□□□ 0.02
RBFOX1-209ENST00000547427 TRBV30A0A0K0K1B3 111 aa15.15■□□□□ 0.02
RBFOX1-209ENST00000547427 Q8IZM0 81 aa15.15■□□□□ 0.02
RBFOX1-209ENST00000547427 ATP5LO75964 103 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms