RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 CFAP161Q6P656 301 aa15.24■□□□□ 0.03
SMARCD1-203ENST00000547247 SPATA12Q7Z6I5 190 aa15.24■□□□□ 0.03
SMARCD1-203ENST00000547247 IGHV3OR16-9A0A0B4J2B5 98 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 LEPROTL1O95214 131 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 NDUFA6P56556 154 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 SEC11AP67812 179 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 FAM19A3Q7Z5A8 133 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 IFI27L1Q96BM0 104 aa15.22■□□□□ 0.03
SMARCD1-203ENST00000547247 KRTAP10-2P60368 255 aa15.21■□□□□ 0.03
SMARCD1-203ENST00000547247 COA6Q5JTJ3 125 aaKnown RBP15.21■□□□□ 0.03
SMARCD1-203ENST00000547247 C5orf38Q86SI9 138 aa15.21■□□□□ 0.03
SMARCD1-203ENST00000547247 PGPEP1Q9NXJ5 209 aa15.21■□□□□ 0.03
SMARCD1-203ENST00000547247 BIRC6Q9NR09 4857 aa15.2■□□□□ 0.02
SMARCD1-203ENST00000547247 MALP21145 153 aa15.2■□□□□ 0.02
SMARCD1-203ENST00000547247 COX6A2Q02221 97 aa15.2■□□□□ 0.02
SMARCD1-203ENST00000547247 PRSS1P07477 247 aa15.19■□□□□ 0.02
SMARCD1-203ENST00000547247 C15orf56Q8N910 161 aa15.19■□□□□ 0.02
SMARCD1-203ENST00000547247 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-203ENST00000547247 HERVK_113P63121 156 aa15.19■□□□□ 0.02
SMARCD1-203ENST00000547247 NTN5Q8WTR8 489 aaPredicted RBP15.19■□□□□ 0.02
SMARCD1-203ENST00000547247 IGHV1-58A0A0C4DH39 117 aa15.18■□□□□ 0.02
SMARCD1-203ENST00000547247 A0A0J9YXV3 536 aa15.18■□□□□ 0.02
SMARCD1-203ENST00000547247 GEMIN7Q9H840 131 aaKnown RBP15.18■□□□□ 0.02
SMARCD1-203ENST00000547247 HSPB8Q9UJY1 196 aa15.18■□□□□ 0.02
SMARCD1-203ENST00000547247 FABP4P15090 132 aa15.17■□□□□ 0.02
SMARCD1-203ENST00000547247 TINCRA0A1B0GVN0 87 aa15.16■□□□□ 0.02
SMARCD1-203ENST00000547247 hDV102S1A0JD36 115 aa15.16■□□□□ 0.02
SMARCD1-203ENST00000547247 APOMO95445 188 aa15.16■□□□□ 0.02
SMARCD1-203ENST00000547247 CDPF1Q6NVV7 123 aa15.16■□□□□ 0.02
SMARCD1-203ENST00000547247 PKHD1P08F94 4074 aa15.16■□□□□ 0.02
SMARCD1-203ENST00000547247 A0A087WZ39 114 aa15.15■□□□□ 0.02
SMARCD1-203ENST00000547247 FUSP35637 526 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCD1-203ENST00000547247 GVQW2A0A096LPI5 108 aaPredicted RBP15.15■□□□□ 0.02
SMARCD1-203ENST00000547247 IGLV5-52A0A0A0MRZ9 124 aa15.15■□□□□ 0.02
SMARCD1-203ENST00000547247 HIGD2BQ4VC39 106 aa15.15■□□□□ 0.02
SMARCD1-203ENST00000547247 TRAV12-1A0A0B4J245 112 aa15.14■□□□□ 0.01
SMARCD1-203ENST00000547247 LINC01561Q8N1V8 128 aa15.12■□□□□ 0.01
SMARCD1-203ENST00000547247 PACRGQ96M98 296 aaPredicted RBP15.12■□□□□ 0.01
SMARCD1-203ENST00000547247 CDKN2A-AS1Q9UH64 79 aa15.12■□□□□ 0.01
SMARCD1-203ENST00000547247 IGLC3P0DOY3 106 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 LINC00469Q8N7U9 141 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 CHTOPQ9Y3Y2 248 aaKnown RBP15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 IGHV3-64A0A075B6Q5 118 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 C16orf90A8MZG2 172 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 ZNF561-AS1K7EIQ3 104 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 CHAC1Q9BUX1 264 aa15.11■□□□□ 0.01
SMARCD1-203ENST00000547247 DYNC1H1Q14204 4646 aaKnown RBP15.1■□□□□ 0.01
SMARCD1-203ENST00000547247 IGLV4-69A0A075B6H9 119 aa15.1■□□□□ 0.01
SMARCD1-203ENST00000547247 OR10D4PQ8NGN7 298 aa15.1■□□□□ 0.01
SMARCD1-203ENST00000547247 IGLV5-45A0A087WSX0 123 aa15.09■□□□□ 0.01
SMARCD1-203ENST00000547247 H0Y8G0 127 aa15.09■□□□□ 0.01
SMARCD1-203ENST00000547247 ORAOV1Q8WV07 137 aa15.09■□□□□ 0.01
SMARCD1-203ENST00000547247 S100A6P06703 90 aa15.08■□□□□ 0
SMARCD1-203ENST00000547247 MAP1LC3CQ9BXW4 147 aa15.08■□□□□ 0
SMARCD1-203ENST00000547247 DNAH5Q8TE73 4624 aa15.08■□□□□ 0
SMARCD1-203ENST00000547247 CNBPP62633 177 aaKnown RBP15.07■□□□□ 0
SMARCD1-203ENST00000547247 LINC00526Q96FQ7 95 aa15.07■□□□□ 0
SMARCD1-203ENST00000547247 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.07■□□□□ 0
SMARCD1-203ENST00000547247 F8VRH5 84 aa15.07■□□□□ 0
SMARCD1-203ENST00000547247 SLPIP03973 132 aa15.07■□□□□ 0
SMARCD1-203ENST00000547247 SPAG11BQ08648 103 aa15.07■□□□□ 0
SMARCD1-203ENST00000547247 MRPL35Q9NZE8 188 aaKnown RBP15.07■□□□□ 0
SMARCD1-203ENST00000547247 GCSHP23434 173 aa15.06■□□□□ 0
SMARCD1-203ENST00000547247 C11orf86A6NJI1 115 aa15.05■□□□□ -0
SMARCD1-203ENST00000547247 H3BRM9 83 aa15.05■□□□□ -0
SMARCD1-203ENST00000547247 ODF1Q14990 250 aa15.05■□□□□ -0
SMARCD1-203ENST00000547247 ZNF22P17026 224 aaPredicted RBP15.04■□□□□ -0
SMARCD1-203ENST00000547247 C9orf163Q8N9P6 203 aa15.03■□□□□ -0
SMARCD1-203ENST00000547247 C2orf48Q96LS8 159 aa15.03■□□□□ -0
SMARCD1-203ENST00000547247 SMIM1B2RUZ4 78 aa15.02□□□□□ -0.01
SMARCD1-203ENST00000547247 LINC01620Q4KN68 170 aa15.02□□□□□ -0.01
SMARCD1-203ENST00000547247 TMEM170BQ5T4T1 132 aa15.02□□□□□ -0.01
SMARCD1-203ENST00000547247 SYS1-DBNDD2H3BUS1 97 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 SPINK8P0C7L1 97 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 SYCNQ0VAF6 134 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 KIAA0087Q14695 138 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 HIST3H2BBQ8N257 126 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 CAMK2N2Q96S95 79 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 TOMM7Q9P0U1 55 aa15.01□□□□□ -0.01
SMARCD1-203ENST00000547247 PRSS2P07478 247 aa15□□□□□ -0.01
SMARCD1-203ENST00000547247 S100A2P29034 98 aa15□□□□□ -0.01
SMARCD1-203ENST00000547247 F8WDY8 70 aa14.99□□□□□ -0.01
SMARCD1-203ENST00000547247 CARD19Q96LW7 228 aa14.99□□□□□ -0.01
SMARCD1-203ENST00000547247 KRTAP10-1P60331 282 aa14.98□□□□□ -0.01
SMARCD1-203ENST00000547247 Q8IZM0 81 aa14.98□□□□□ -0.01
SMARCD1-203ENST00000547247 LRP1BQ9NZR2 4599 aa14.98□□□□□ -0.01
SMARCD1-203ENST00000547247 SNRPEP62304 92 aaKnown RBP14.98□□□□□ -0.01
SMARCD1-203ENST00000547247 C6orf226Q5I0X4 101 aa14.98□□□□□ -0.01
SMARCD1-203ENST00000547247 C3orf79P0CE67 100 aa14.97□□□□□ -0.01
SMARCD1-203ENST00000547247 PLNP26678 52 aa14.97□□□□□ -0.01
SMARCD1-203ENST00000547247 PET117Q6UWS5 81 aa14.97□□□□□ -0.01
SMARCD1-203ENST00000547247 Q6ZRU5 148 aa14.97□□□□□ -0.01
SMARCD1-203ENST00000547247 PMCHL2Q9BQD1 86 aa14.97□□□□□ -0.01
SMARCD1-203ENST00000547247 NDUFA1O15239 70 aa14.96□□□□□ -0.01
SMARCD1-203ENST00000547247 DPM2O94777 84 aa14.96□□□□□ -0.01
SMARCD1-203ENST00000547247 KRTDAPP60985 99 aa14.95□□□□□ -0.02
SMARCD1-203ENST00000547247 HIST1H2BLQ99880 126 aa14.95□□□□□ -0.02
SMARCD1-203ENST00000547247 IGLV5-39A0A0G2JS06 123 aa14.94□□□□□ -0.02
SMARCD1-203ENST00000547247 C5orf52A6NGY3 159 aa14.94□□□□□ -0.02
SMARCD1-203ENST00000547247 COX7B2Q8TF08 81 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 501.3 ms