RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
RAB5C-203ENST00000546881 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
RAB5C-203ENST00000546881 COA6Q5JTJ3 125 aaKnown RBP7.28□□□□□ -1.24
RAB5C-203ENST00000546881 OR5A1Q8NGJ0 315 aa7.28□□□□□ -1.24
RAB5C-203ENST00000546881 SPACA4Q8TDM5 124 aa7.28□□□□□ -1.24
RAB5C-203ENST00000546881 C7orf33Q8WU49 177 aa7.28□□□□□ -1.24
RAB5C-203ENST00000546881 LOC105371267A0A1B0GV96 52 aa7.27□□□□□ -1.25
RAB5C-203ENST00000546881 C5orf52A6NGY3 159 aa7.27□□□□□ -1.25
RAB5C-203ENST00000546881 ZNF25P17030 456 aaPredicted RBP7.27□□□□□ -1.25
RAB5C-203ENST00000546881 RPL32P62910 135 aaKnown RBP7.27□□□□□ -1.25
RAB5C-203ENST00000546881 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
RAB5C-203ENST00000546881 IGKV2-24A0A0C4DH68 120 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 ESDP10768 282 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 COX6A2Q02221 97 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 MAJINQ3KP22 176 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 CFAP161Q6P656 301 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
RAB5C-203ENST00000546881 LINC00310P59036 64 aa7.25□□□□□ -1.25
RAB5C-203ENST00000546881 PLAC8Q9NZF1 115 aa7.25□□□□□ -1.25
RAB5C-203ENST00000546881 Q8N8P6 123 aa7.24□□□□□ -1.25
RAB5C-203ENST00000546881 PRSS3P2Q8NHM4 247 aa7.24□□□□□ -1.25
RAB5C-203ENST00000546881 ALKBH7Q9BT30 221 aaPredicted RBP7.24□□□□□ -1.25
RAB5C-203ENST00000546881 NXT2Q9NPJ8 142 aaKnown RBP7.24□□□□□ -1.25
RAB5C-203ENST00000546881 RPL39P62891 51 aaKnown RBP7.23□□□□□ -1.25
RAB5C-203ENST00000546881 MRPL52Q86TS9 123 aaKnown RBP7.23□□□□□ -1.25
RAB5C-203ENST00000546881 ZNF664Q8N3J9 261 aa7.23□□□□□ -1.25
RAB5C-203ENST00000546881 STPG4Q8N801 248 aa7.23□□□□□ -1.25
RAB5C-203ENST00000546881 C18orf32Q8TCD1 76 aa7.23□□□□□ -1.25
RAB5C-203ENST00000546881 CHCHD10Q8WYQ3 142 aaPredicted RBP7.23□□□□□ -1.25
RAB5C-203ENST00000546881 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 S100A6P06703 90 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 IFI27P40305 119 aaPredicted RBP7.22□□□□□ -1.25
RAB5C-203ENST00000546881 NDUFA6P56556 154 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 SNRPEP62304 92 aaKnown RBP7.22□□□□□ -1.25
RAB5C-203ENST00000546881 SS18Q15532 418 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 ORMDL2Q53FV1 153 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 RNASE13Q5GAN3 156 aaKnown RBP7.22□□□□□ -1.25
RAB5C-203ENST00000546881 HIST3H2BBQ8N257 126 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 UBE2D4Q9Y2X8 147 aa7.22□□□□□ -1.25
RAB5C-203ENST00000546881 PRSS47A8MTI9 375 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 PRR3P79522 188 aaKnown RBP7.21□□□□□ -1.26
RAB5C-203ENST00000546881 ODF1Q14990 250 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 Q6ZUT4 128 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 FA2HQ7L5A8 372 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
RAB5C-203ENST00000546881 A0A096LNI7 61 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 TRAV13-1A0A0B4J241 112 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 K7EMI3 77 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 G0S2P27469 103 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 XCL1P47992 114 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 URB1-AS1Q96HZ7 61 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 TIMM21Q9BVV7 248 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 CYSLTR1Q9Y271 337 aa7.2□□□□□ -1.26
RAB5C-203ENST00000546881 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
RAB5C-203ENST00000546881 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
RAB5C-203ENST00000546881 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 CCL25O15444 150 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 SERF1AO75920 110 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 C2orf66Q6UXQ4 117 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 Q6ZN92 141 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 LINC00526Q96FQ7 95 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
RAB5C-203ENST00000546881 NUPR1O60356 82 aa7.18□□□□□ -1.26
RAB5C-203ENST00000546881 FOXI1Q12951 378 aa7.18□□□□□ -1.26
RAB5C-203ENST00000546881 TNXBP22105 4242 aa7.18□□□□□ -1.26
RAB5C-203ENST00000546881 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
RAB5C-203ENST00000546881 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
RAB5C-203ENST00000546881 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
RAB5C-203ENST00000546881 C2orf88Q9BSF0 95 aa7.17□□□□□ -1.26
RAB5C-203ENST00000546881 MALP21145 153 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 MRPS36P82909 103 aaKnown RBP7.16□□□□□ -1.26
RAB5C-203ENST00000546881 PDZD11Q5EBL8 140 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 REG3GQ6UW15 175 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 TEX43Q6ZNM6 134 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 BAGE3Q86Y29 109 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
RAB5C-203ENST00000546881 LINC00474Q9P2X8 69 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 PKIGQ9Y2B9 76 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
RAB5C-203ENST00000546881 LRP2P98164 4655 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 IGLV4-3A0A075B6K6 122 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 LINC01546A6NGU7 62 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 ZNF561-AS1K7EIQ3 104 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 SCGB3A1Q96QR1 104 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 VCX2Q9H322 139 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 RNF213Q63HN8 5207 aa7.15□□□□□ -1.26
RAB5C-203ENST00000546881 COX7A2LO14548 114 aa7.14□□□□□ -1.27
RAB5C-203ENST00000546881 PAPPA-AS1Q5QFB9 102 aa7.14□□□□□ -1.27
RAB5C-203ENST00000546881 TOMM6Q96B49 74 aa7.14□□□□□ -1.27
RAB5C-203ENST00000546881 CHCHD1Q96BP2 118 aaKnown RBP7.14□□□□□ -1.27
RAB5C-203ENST00000546881 LINC01549A6NIU2 74 aa7.13□□□□□ -1.27
RAB5C-203ENST00000546881 LINC00614P0C842 121 aa7.13□□□□□ -1.27
RAB5C-203ENST00000546881 FABP4P15090 132 aa7.13□□□□□ -1.27
RAB5C-203ENST00000546881 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms