RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SETXQ7Z333 2677 aaKnown RBP-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 ARHGEF5Q12774 1597 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 CHKB-CPT1BH3BT56 60 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 IFNGP01579 166 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 MGPP08493 103 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 SPTA1P02549 2419 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 TSC2P49815 1807 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 ARHGEF12Q9NZN5 1544 aa-0.64□□□□□ -2.51
CCDC38-204ENST00000546816 PDZD2O15018 2839 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 A2ML1A8K2U0 1454 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 POLA1P09884 1462 aaPredicted RBP-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 OOSP1A8MZH6 123 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 HMGN1P05114 100 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 IGLC1P0CG04 106 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 MYOZ3Q8TDC0 251 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 C1orf54Q8WWF1 131 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 TSC22D3Q99576 134 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 NXT2Q9NPJ8 142 aaKnown RBP-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 ACANP16112 2415 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 ROBO1Q9Y6N7 1651 aa-0.65□□□□□ -2.51
CCDC38-204ENST00000546816 CHD8Q9HCK8 2581 aa-0.66□□□□□ -2.51
CCDC38-204ENST00000546816 GOLGA4Q13439 2230 aaKnown RBP-0.66□□□□□ -2.51
CCDC38-204ENST00000546816 TRBV7-4A0A0J9YYF1 115 aa-0.66□□□□□ -2.52
CCDC38-204ENST00000546816 C10orf113Q5VZT2 155 aa-0.66□□□□□ -2.52
CCDC38-204ENST00000546816 PP6455Q8WZ26 134 aa-0.66□□□□□ -2.52
CCDC38-204ENST00000546816 FAM107BQ9H098 131 aa-0.66□□□□□ -2.52
CCDC38-204ENST00000546816 PSME4Q14997 1843 aa-0.66□□□□□ -2.52
CCDC38-204ENST00000546816 FLNBO75369 2602 aaKnown RBP-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 MAGI1Q96QZ7 1491 aaPredicted RBP-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 HMGXB3Q12766 1538 aa-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 LINC00959A0A1B0GUT2 108 aa-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 LOC730098B7Z3J9 87 aa-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 SPINK4O60575 86 aa-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 AKAIN1P0CW23 69 aa-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 MAP1AP78559 2803 aaPredicted RBP-0.67□□□□□ -2.52
CCDC38-204ENST00000546816 KTN1Q86UP2 1357 aaKnown RBP-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 KDM5AP29375 1690 aaKnown RBP-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 UBE2L5PA0A1B0GUS4 154 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 UBE2L3P68036 154 aaKnown RBP-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 WHAMMP3Q1A5X7 153 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 FAM223AQ8IWN6 122 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 FAM167A-AS1Q96KT0 104 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 FAIMQ9NVQ4 179 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 UQCR10Q9UDW1 63 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 MYH7P12883 1935 aa-0.68□□□□□ -2.52
CCDC38-204ENST00000546816 TET3O43151 1660 aa-0.69□□□□□ -2.52
CCDC38-204ENST00000546816 C9orf153Q5TBE3 101 aa-0.69□□□□□ -2.52
CCDC38-204ENST00000546816 DPH3P1Q9H4G8 78 aa-0.69□□□□□ -2.52
CCDC38-204ENST00000546816 ARL2-SNX15V9GYD0 113 aa-0.69□□□□□ -2.52
CCDC38-204ENST00000546816 ROCK2O75116 1388 aaKnown RBP-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 BTAF1O14981 1849 aa-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 UBA52P62987 128 aaKnown RBP-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 PKHD1P08F94 4074 aa-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 EHBP1L1Q8N3D4 1523 aa-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 HERC1Q15751 4861 aa-0.7□□□□□ -2.52
CCDC38-204ENST00000546816 M0R2T5 61 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 DEFB105AQ8NG35 78 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 LINC01600Q96MT4 127 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 FXYD6Q9H0Q3 95 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 URB1O60287 2271 aaKnown RBP-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 NF1P21359 2839 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 KIAA0556O60303 1618 aa-0.71□□□□□ -2.52
CCDC38-204ENST00000546816 IQSEC2Q5JU85 1478 aa-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 ATP5EP56381 51 aaPredicted RBP-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 UBE2D3P61077 147 aa-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 GNG11P61952 73 aa-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 UBE2D2P62837 147 aa-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 KLK9Q2XQG4 91 aa-0.72□□□□□ -2.52
CCDC38-204ENST00000546816 FLGP20930 4061 aaPredicted RBP-0.72□□□□□ -2.53
CCDC38-204ENST00000546816 SCAPERQ9BY12 1400 aa-0.72□□□□□ -2.53
CCDC38-204ENST00000546816 ADGRL2O95490 1459 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 SETBP1Q9Y6X0 1596 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 F6UZH7 168 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 Q0VG73 95 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 STAB2Q8WWQ8 2551 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 MYOM2P54296 1465 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 C1orf167Q5SNV9 1468 aa-0.73□□□□□ -2.53
CCDC38-204ENST00000546816 DIP2CQ9Y2E4 1556 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 CUL7Q14999 1698 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 FAM24AA6NFZ4 105 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 RPL13AP3Q6NVV1 102 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 FDCSPQ8NFU4 85 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 LCN9Q8WX39 176 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 MANBALQ9NQG1 85 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 IER3IP1Q9Y5U9 82 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 MRC2Q9UBG0 1479 aa-0.74□□□□□ -2.53
CCDC38-204ENST00000546816 NBEAL1Q6ZS30 2694 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 COX6CP09669 75 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 COX8AP10176 69 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 USMG5Q96IX5 58 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 PRO1933Q9H354 126 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 CREBBPQ92793 2442 aa-0.75□□□□□ -2.53
CCDC38-204ENST00000546816 SVEP1Q4LDE5 3571 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 DNAJC13O75165 2243 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 CNOT1A5YKK6 2376 aaKnown RBP-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 A0A1B0GWA3 101 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 FAM223BA6NKX1 122 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 SNAPC5O75971 98 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 PRO1854Q9UHT4 67 aa-0.76□□□□□ -2.53
CCDC38-204ENST00000546816 NALCNQ8IZF0 1738 aa-0.76□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms