RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TEX49A0A1B0GTD5 131 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 WIPF1O43516 503 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 IGLV1-40P01703 118 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 DNAJC9-AS1A6NH13 148 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 MED14OSP0DP75 135 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 LINC00482Q8N8I6 264 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 ZNF702PQ9H963 129 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 SPANXCQ9NY87 97 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 COL6A5A8TX70 2615 aa7.18□□□□□ -1.26
TRAF1-203ENST00000546084 LEPROTO15243 131 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
TRAF1-203ENST00000546084 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
TRAF1-203ENST00000546084 IGLV4-3A0A075B6K6 122 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 KLLNB2CW77 178 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 H3BUA1 57 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 LINC01620Q4KN68 170 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 VPS13CQ709C8 3753 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 SOCS3O14543 225 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 ZNF22P17026 224 aaPredicted RBP7.17□□□□□ -1.26
TRAF1-203ENST00000546084 LINC00315P59091 139 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 RNF152Q8N8N0 203 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 DSCR8Q96T75 97 aa7.17□□□□□ -1.26
TRAF1-203ENST00000546084 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 K7EMT4 169 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 ZNF843Q8N446 348 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 KIF25-AS1Q9Y6Z4 181 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 TRBV27A0A0K0K1C4 114 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 UQCRQO14949 82 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 DNAL4O96015 105 aa7.16□□□□□ -1.26
TRAF1-203ENST00000546084 TMEM223A0PJW6 202 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 PIK3CD-AS1Q5SR53 167 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 C3orf22Q8N5N4 141 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 IL17DQ8TAD2 202 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 LINC00526Q96FQ7 95 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 MALP21145 153 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 DEFB114Q30KQ6 69 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 Q6YL49 198 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 UBE2WQ96B02 151 aa7.15□□□□□ -1.26
TRAF1-203ENST00000546084 A0A0J9YXY3 114 aa7.15□□□□□ -1.27
TRAF1-203ENST00000546084 RHOHQ15669 191 aa7.14□□□□□ -1.27
TRAF1-203ENST00000546084 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
TRAF1-203ENST00000546084 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
TRAF1-203ENST00000546084 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
TRAF1-203ENST00000546084 TRIAP1O43715 76 aa7.14□□□□□ -1.27
TRAF1-203ENST00000546084 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
TRAF1-203ENST00000546084 Q9HAA7 133 aa7.14□□□□□ -1.27
TRAF1-203ENST00000546084 LGALS9O00182 355 aa7.13□□□□□ -1.27
TRAF1-203ENST00000546084 TMEM263Q8WUH6 116 aaKnown RBP7.13□□□□□ -1.27
TRAF1-203ENST00000546084 TMEM243Q9BU79 118 aa7.13□□□□□ -1.27
TRAF1-203ENST00000546084 ZFHX3Q15911 3703 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 POM121L12Q8N7R1 296 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 ICOSQ9Y6W8 199 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 NSD1Q96L73 2696 aaPredicted RBP7.12□□□□□ -1.27
TRAF1-203ENST00000546084 A0A0B4J2C4 111 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 ATP5G1P05496 136 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 OXLD1Q5BKU9 147 aa7.12□□□□□ -1.27
TRAF1-203ENST00000546084 RBM3P98179 157 aaKnown RBP7.11□□□□□ -1.27
TRAF1-203ENST00000546084 ODF3L2Q3SX64 289 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 TRBV6-5A0A0K0K1A5 114 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 GYPEP15421 78 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 TMEM89A2RUT3 159 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 ANGP03950 147 aaKnown RBP7.11□□□□□ -1.27
TRAF1-203ENST00000546084 FAM19A4Q96LR4 140 aa7.11□□□□□ -1.27
TRAF1-203ENST00000546084 AMELXQ99217 191 aa7.1□□□□□ -1.27
TRAF1-203ENST00000546084 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
TRAF1-203ENST00000546084 COX6A2Q02221 97 aa7.1□□□□□ -1.27
TRAF1-203ENST00000546084 CRPP02741 224 aa7.1□□□□□ -1.27
TRAF1-203ENST00000546084 C9orf85Q96MD7 179 aa7.1□□□□□ -1.27
TRAF1-203ENST00000546084 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
TRAF1-203ENST00000546084 VSIG2Q96IQ7 327 aa7.09□□□□□ -1.27
TRAF1-203ENST00000546084 HIST1H4AP62805 103 aaKnown RBP7.09□□□□□ -1.27
TRAF1-203ENST00000546084 COPS9Q8WXC6 57 aa7.09□□□□□ -1.27
TRAF1-203ENST00000546084 A0A1B0GX51 115 aa7.09□□□□□ -1.28
TRAF1-203ENST00000546084 K7EQD1 137 aa7.08□□□□□ -1.28
TRAF1-203ENST00000546084 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
TRAF1-203ENST00000546084 MIR7-3HGQ8N6C7 128 aa7.08□□□□□ -1.28
TRAF1-203ENST00000546084 LINC01006Q8NI28 216 aa7.08□□□□□ -1.28
TRAF1-203ENST00000546084 SLPIP03973 132 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 KLK9Q2XQG4 91 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 SBSPONQ8IVN8 264 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 C4orf3Q8WVX3 66 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 TRBV30A0A0K0K1B3 111 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 INAFM1C9JVW0 142 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 H7C423 109 aa7.07□□□□□ -1.28
TRAF1-203ENST00000546084 BAHCC1Q9P281 2608 aa7.06□□□□□ -1.28
TRAF1-203ENST00000546084 MIAQ16674 131 aa7.06□□□□□ -1.28
TRAF1-203ENST00000546084 J3QKU1 62 aa7.06□□□□□ -1.28
TRAF1-203ENST00000546084 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
TRAF1-203ENST00000546084 ATOX1O00244 68 aa7.05□□□□□ -1.28
TRAF1-203ENST00000546084 TMEM258P61165 79 aa7.05□□□□□ -1.28
TRAF1-203ENST00000546084 DAD1P61803 113 aa7.05□□□□□ -1.28
TRAF1-203ENST00000546084 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
TRAF1-203ENST00000546084 PRB2P02812 416 aaPredicted RBP7.05□□□□□ -1.28
TRAF1-203ENST00000546084 PRR3P79522 188 aaKnown RBP7.05□□□□□ -1.28
TRAF1-203ENST00000546084 PDZD2O15018 2839 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms