RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PPBPP02775 128 aa13.12□□□□□ -0.31
SCARB1-210ENST00000545493 MRPS36P82909 103 aaKnown RBP13.12□□□□□ -0.31
SCARB1-210ENST00000545493 ORMDL3Q8N138 153 aa13.12□□□□□ -0.31
SCARB1-210ENST00000545493 OR10D4PQ8NGN7 298 aa13.11□□□□□ -0.31
SCARB1-210ENST00000545493 IGHV3OR16-9A0A0B4J2B5 98 aa13.1□□□□□ -0.31
SCARB1-210ENST00000545493 A0A1W2PNN7 141 aa13.1□□□□□ -0.31
SCARB1-210ENST00000545493 IFITM10A6NMD0 228 aa13.1□□□□□ -0.31
SCARB1-210ENST00000545493 RPL18AQ02543 176 aaKnown RBP13.09□□□□□ -0.31
SCARB1-210ENST00000545493 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
SCARB1-210ENST00000545493 ORAOV1Q8WV07 137 aa13.09□□□□□ -0.31
SCARB1-210ENST00000545493 PRELID3AQ96N28 172 aa13.09□□□□□ -0.31
SCARB1-210ENST00000545493 A0A0J9YXV3 536 aa13.08□□□□□ -0.32
SCARB1-210ENST00000545493 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
SCARB1-210ENST00000545493 Q6ZRP5 223 aa13.07□□□□□ -0.32
SCARB1-210ENST00000545493 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
SCARB1-210ENST00000545493 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
SCARB1-210ENST00000545493 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-210ENST00000545493 SPINK6Q6UWN8 80 aa13.06□□□□□ -0.32
SCARB1-210ENST00000545493 MRPL35Q9NZE8 188 aaKnown RBP13.06□□□□□ -0.32
SCARB1-210ENST00000545493 IFI27P40305 119 aaPredicted RBP13.05□□□□□ -0.32
SCARB1-210ENST00000545493 PNRC1Q12796 327 aaPredicted RBP13.05□□□□□ -0.32
SCARB1-210ENST00000545493 SRSF9Q13242 221 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCARB1-210ENST00000545493 ODF1Q14990 250 aa13.04□□□□□ -0.32
SCARB1-210ENST00000545493 C10orf25Q5T742 122 aa13.04□□□□□ -0.32
SCARB1-210ENST00000545493 PYGO1Q9Y3Y4 419 aa13.04□□□□□ -0.32
SCARB1-210ENST00000545493 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
SCARB1-210ENST00000545493 RAB5AP20339 215 aa13.03□□□□□ -0.32
SCARB1-210ENST00000545493 LAMTOR2Q9Y2Q5 125 aa13.03□□□□□ -0.32
SCARB1-210ENST00000545493 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.33
SCARB1-210ENST00000545493 NDUFA1O15239 70 aa13.02□□□□□ -0.33
SCARB1-210ENST00000545493 LINC00242Q5T6M2 205 aa13.02□□□□□ -0.33
SCARB1-210ENST00000545493 ANAPC16Q96DE5 110 aa13.02□□□□□ -0.33
SCARB1-210ENST00000545493 C6orf48Q9UBA6 75 aa13.02□□□□□ -0.33
SCARB1-210ENST00000545493 TGIF2-C20orf24A0A0A6YYL0 155 aa13.01□□□□□ -0.33
SCARB1-210ENST00000545493 F8WDY8 70 aa13.01□□□□□ -0.33
SCARB1-210ENST00000545493 PHF5AQ7RTV0 110 aaKnown RBP13.01□□□□□ -0.33
SCARB1-210ENST00000545493 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
SCARB1-210ENST00000545493 MT-ND4LP03901 98 aa13□□□□□ -0.33
SCARB1-210ENST00000545493 KIAA0087Q14695 138 aa13□□□□□ -0.33
SCARB1-210ENST00000545493 TMEM141Q96I45 108 aa13□□□□□ -0.33
SCARB1-210ENST00000545493 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
SCARB1-210ENST00000545493 A0A087WZ39 114 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 TLX1NBP0CAT3 122 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 Q8N8P6 123 aa12.99□□□□□ -0.33
SCARB1-210ENST00000545493 UBE2D1P51668 147 aa12.98□□□□□ -0.33
SCARB1-210ENST00000545493 FAM168BA1KXE4 195 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 RAB14P61106 215 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 ZC2HC1BQ5TFG8 222 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 C2orf66Q6UXQ4 117 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 TEX43Q6ZNM6 134 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 IMMP2LQ96T52 175 aa12.97□□□□□ -0.33
SCARB1-210ENST00000545493 ADCYAP1P18509 176 aa12.96□□□□□ -0.33
SCARB1-210ENST00000545493 KRTAP10-8P60410 259 aa12.96□□□□□ -0.33
SCARB1-210ENST00000545493 CYSLTR1Q9Y271 337 aa12.96□□□□□ -0.33
SCARB1-210ENST00000545493 MT-ND6P03923 174 aa12.95□□□□□ -0.34
SCARB1-210ENST00000545493 CLLU1Q5K131 121 aa12.95□□□□□ -0.34
SCARB1-210ENST00000545493 AMELXQ99217 191 aa12.95□□□□□ -0.34
SCARB1-210ENST00000545493 C1orf137Q5JT78 98 aa12.94□□□□□ -0.34
SCARB1-210ENST00000545493 C2orf88Q9BSF0 95 aa12.94□□□□□ -0.34
SCARB1-210ENST00000545493 RNF213Q63HN8 5207 aa12.93□□□□□ -0.34
SCARB1-210ENST00000545493 ORMDL2Q53FV1 153 aa12.93□□□□□ -0.34
SCARB1-210ENST00000545493 C2orf82Q6UX34 121 aa12.93□□□□□ -0.34
SCARB1-210ENST00000545493 FAM19A5Q7Z5A7 132 aaPredicted RBP12.93□□□□□ -0.34
SCARB1-210ENST00000545493 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
SCARB1-210ENST00000545493 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
SCARB1-210ENST00000545493 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
SCARB1-210ENST00000545493 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
SCARB1-210ENST00000545493 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
SCARB1-210ENST00000545493 IGIPA6NJ69 53 aa12.91□□□□□ -0.34
SCARB1-210ENST00000545493 Q6ZN92 141 aa12.91□□□□□ -0.34
SCARB1-210ENST00000545493 LINC01561Q8N1V8 128 aa12.91□□□□□ -0.34
SCARB1-210ENST00000545493 K7EMI3 77 aa12.9□□□□□ -0.34
SCARB1-210ENST00000545493 CTDSP1Q9GZU7 261 aa12.9□□□□□ -0.34
SCARB1-210ENST00000545493 NPSP0C0P6 89 aa12.89□□□□□ -0.35
SCARB1-210ENST00000545493 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
SCARB1-210ENST00000545493 LPAP08519 4548 aa12.88□□□□□ -0.35
SCARB1-210ENST00000545493 VCX2Q9H322 139 aa12.88□□□□□ -0.35
SCARB1-210ENST00000545493 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
SCARB1-210ENST00000545493 NDUFC2-KCTD14E9PQ53 114 aa12.87□□□□□ -0.35
SCARB1-210ENST00000545493 C9orf129Q5T035 196 aaKnown RBP12.87□□□□□ -0.35
SCARB1-210ENST00000545493 M0QXV9 152 aa12.86□□□□□ -0.35
SCARB1-210ENST00000545493 IGLV7-43P04211 117 aa12.86□□□□□ -0.35
SCARB1-210ENST00000545493 KIAA1644Q3SXP7 199 aa12.86□□□□□ -0.35
SCARB1-210ENST00000545493 PACRGQ96M98 296 aaPredicted RBP12.86□□□□□ -0.35
SCARB1-210ENST00000545493 IFITM2Q01629 132 aa12.85□□□□□ -0.35
SCARB1-210ENST00000545493 TIMM17AQ99595 171 aa12.85□□□□□ -0.35
SCARB1-210ENST00000545493 TMEM218A2RU14 115 aa12.84□□□□□ -0.35
SCARB1-210ENST00000545493 UQCC3Q6UW78 93 aa12.84□□□□□ -0.35
SCARB1-210ENST00000545493 TOMM6Q96B49 74 aa12.84□□□□□ -0.35
SCARB1-210ENST00000545493 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
SCARB1-210ENST00000545493 Q8IZM0 81 aa12.83□□□□□ -0.36
SCARB1-210ENST00000545493 CDKN2A-AS1Q9UH64 79 aa12.83□□□□□ -0.36
SCARB1-210ENST00000545493 TRAV9-1A0A075B6T8 112 aa12.82□□□□□ -0.36
SCARB1-210ENST00000545493 PRSS2P07478 247 aa12.82□□□□□ -0.36
SCARB1-210ENST00000545493 HERVK_113P63121 156 aa12.82□□□□□ -0.36
SCARB1-210ENST00000545493 H0Y9J4 135 aa12.8□□□□□ -0.36
SCARB1-210ENST00000545493 PAPPA-AS1Q5QFB9 102 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms