RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 VCYO14598 125 aa4.11□□□□□ -1.75
COPA-207ENST00000545284 UPK1BO75841 260 aa4.11□□□□□ -1.75
COPA-207ENST00000545284 MBD3L1Q8WWY6 194 aa4.11□□□□□ -1.75
COPA-207ENST00000545284 TMEM242Q9NWH2 141 aa4.11□□□□□ -1.75
COPA-207ENST00000545284 ANAPC11Q9NYG5 84 aa4.11□□□□□ -1.75
COPA-207ENST00000545284 PPP1R17O96001 155 aa4.1□□□□□ -1.75
COPA-207ENST00000545284 CCL20P78556 96 aa4.1□□□□□ -1.75
COPA-207ENST00000545284 KIAA0087Q14695 138 aa4.1□□□□□ -1.75
COPA-207ENST00000545284 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
COPA-207ENST00000545284 C11orf52Q96A22 123 aa4.1□□□□□ -1.75
COPA-207ENST00000545284 ZNF727A8MUV8 499 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 UMAD1C9J7I0 102 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 TCAPO15273 167 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 FCER1GP30273 86 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 C4orf48Q5BLP8 95 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 XP32Q5T750 250 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 KCNRGQ8N5I3 272 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 DAND5Q8N907 189 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 SFT2D1Q8WV19 159 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 KIR2DL4Q99706 377 aa4.09□□□□□ -1.75
COPA-207ENST00000545284 RNASE7Q9H1E1 156 aaKnown RBP4.09□□□□□ -1.75
COPA-207ENST00000545284 TGIF2-C20orf24A0A0A6YYL0 155 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 UBE2AP49459 152 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 GNG4P50150 75 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 FOXA3P55318 350 aaPredicted RBP4.08□□□□□ -1.76
COPA-207ENST00000545284 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 S100ZQ8WXG8 99 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 NDUFA12Q9UI09 145 aa4.08□□□□□ -1.76
COPA-207ENST00000545284 SPINK1P00995 79 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 MRPS36P82909 103 aaKnown RBP4.07□□□□□ -1.76
COPA-207ENST00000545284 RNASE13Q5GAN3 156 aaKnown RBP4.07□□□□□ -1.76
COPA-207ENST00000545284 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 MANBALQ9NQG1 85 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 SPANXA1Q9NS26 97 aa4.07□□□□□ -1.76
COPA-207ENST00000545284 M0R2T5 61 aa4.06□□□□□ -1.76
COPA-207ENST00000545284 Q6ZUT4 128 aa4.06□□□□□ -1.76
COPA-207ENST00000545284 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
COPA-207ENST00000545284 TMEM191AQ9H0A3 160 aa4.06□□□□□ -1.76
COPA-207ENST00000545284 PPP1R2P9O14990 202 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 PDE6DO43924 150 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 H2AFB1P0C5Y9 115 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 SUMO2P61956 95 aaKnown RBP4.05□□□□□ -1.76
COPA-207ENST00000545284 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
COPA-207ENST00000545284 HBBP68871 147 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 C2orf82Q6UX34 121 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 LINC00167Q96N53 147 aa4.05□□□□□ -1.76
COPA-207ENST00000545284 hCG_2014768A0A024R1R8 64 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 DEFA1P59665 94 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 CKS1BP61024 79 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 PLEKHB2Q96CS7 222 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 XAGE1AQ9HD64 81 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 NDUFA13Q9P0J0 144 aa4.04□□□□□ -1.76
COPA-207ENST00000545284 TRBV20OR9-2A0A075B6H5 130 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 IGLV5-37A0A075B6J1 123 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 RPL37AP8A6NKH3 93 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 IFITM10A6NMD0 228 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 A8MWL6 223 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 LCE2BO14633 110 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 GIPP09681 153 aaPredicted RBP4.03□□□□□ -1.76
COPA-207ENST00000545284 RAB4AP20338 218 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 RPL32P62910 135 aaKnown RBP4.03□□□□□ -1.76
COPA-207ENST00000545284 Q5BKY6 102 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 C6orf226Q5I0X4 101 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 Q8IZM0 81 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 FAM213BQ8TBF2 198 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 FAM104AQ969W3 186 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 BORCS7Q96B45 105 aa4.03□□□□□ -1.76
COPA-207ENST00000545284 FXYD6-FXYD2A0A087WZ82 144 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 PRSS2P07478 247 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 PNRC1Q12796 327 aaPredicted RBP4.02□□□□□ -1.77
COPA-207ENST00000545284 CT83Q5H943 113 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 Q6ZN92 141 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 LINC00469Q8N7U9 141 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 C20orf78Q9BR46 151 aa4.02□□□□□ -1.77
COPA-207ENST00000545284 GEMIN7Q9H840 131 aaKnown RBP4.02□□□□□ -1.77
COPA-207ENST00000545284 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 A0A1B0GUT8 65 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 A0A1B0GV50 99 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 F8VRH5 84 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 TEX46H3BTG2 121 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 CFC1P0CG37 223 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 IFITM3Q01628 133 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 FAM231DQ6ZW35 169 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 NRACQ8N912 160 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 MED9Q9NWA0 146 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 GNG13Q9P2W3 67 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 PYGO1Q9Y3Y4 419 aa4.01□□□□□ -1.77
COPA-207ENST00000545284 TRBV24-1A0A075B6N3 115 aa4□□□□□ -1.77
COPA-207ENST00000545284 LINC00862A6NCI5 91 aa4□□□□□ -1.77
COPA-207ENST00000545284 SLC25A20O43772 301 aa4□□□□□ -1.77
COPA-207ENST00000545284 CXCL5P42830 114 aa4□□□□□ -1.77
COPA-207ENST00000545284 RPL39P62891 51 aaKnown RBP4□□□□□ -1.77
COPA-207ENST00000545284 NKAPP1Q8N9T2 125 aa4□□□□□ -1.77
COPA-207ENST00000545284 USH2AO75445 5202 aa3.99□□□□□ -1.77
COPA-207ENST00000545284 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms