RNA–Protein interactions for RNA: ENST00000545153.5

PTPN6-223, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 3

Gene PTPN6, Length 959 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-223	ENST00000545153	G0S2	P27469	103 aa		9.21	□□□□□ -0.94
PTPN6-223	ENST00000545153	ZC2HC1B	Q5TFG8	222 aa		9.21	□□□□□ -0.94
PTPN6-223	ENST00000545153	VCX2	Q9H322	139 aa		9.21	□□□□□ -0.94
PTPN6-223	ENST00000545153	PANO1	I0J062	215 aa		9.2	□□□□□ -0.94
PTPN6-223	ENST00000545153		Q5VSD8	79 aa		9.2	□□□□□ -0.94
PTPN6-223	ENST00000545153	TEX43	Q6ZNM6	134 aa		9.2	□□□□□ -0.94
PTPN6-223	ENST00000545153	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.2	□□□□□ -0.94
PTPN6-223	ENST00000545153	IGHV3OR16-9	A0A0B4J2B5	98 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153		Q6ZN92	141 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153	FA2H	Q7L5A8	372 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153	TOMM6	Q96B49	74 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153	DPH3	Q96FX2	82 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153	YPEL4	Q96NS1	127 aa		9.19	□□□□□ -0.94
PTPN6-223	ENST00000545153	IGLV4-69	A0A075B6H9	119 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	LINC01546	A6NGU7	62 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	APOM	O95445	188 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	COX6A2	Q02221	97 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	LINC00242	Q5T6M2	205 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	VPS13B	Q7Z7G8	4022 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	SCGB3A1	Q96QR1	104 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	AMELX	Q99217	191 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	C2orf88	Q9BSF0	95 aa		9.18	□□□□□ -0.94
PTPN6-223	ENST00000545153	NPS	P0C0P6	89 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	UBE2D1	P51668	147 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	SYCN	Q0VAF6	134 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	LINC00173	Q6ZV60	143 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	CBLN2	Q8IUK8	224 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	SMCO4	Q9NRQ5	59 aa		9.17	□□□□□ -0.94
PTPN6-223	ENST00000545153	CHTF8	P0CG12	524 aa		9.16	□□□□□ -0.94
PTPN6-223	ENST00000545153	ERAS	Q7Z444	233 aa		9.16	□□□□□ -0.94
PTPN6-223	ENST00000545153	LINC00528	Q8N1L1	170 aa		9.16	□□□□□ -0.94
PTPN6-223	ENST00000545153	TIMM17A	Q99595	171 aa		9.16	□□□□□ -0.94
PTPN6-223	ENST00000545153	PAPPA-AS1	Q5QFB9	102 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	C18orf32	Q8TCD1	76 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	ORAOV1	Q8WV07	137 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	URB1-AS1	Q96HZ7	61 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	CARD19	Q96LW7	228 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	CAMK2N2	Q96S95	79 aa		9.15	□□□□□ -0.94
PTPN6-223	ENST00000545153	SRRM2	Q9UQ35	2752 aa	Known RBP	9.15	□□□□□ -0.95
PTPN6-223	ENST00000545153		A0A087WZ39	114 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	LINC00614	P0C842	121 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	INAFM2	P0DMQ5	153 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	SPAG11B	Q08648	103 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153		Q6ZRU5	148 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	OR10D4P	Q8NGN7	298 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	C2orf48	Q96LS8	159 aa		9.14	□□□□□ -0.95
PTPN6-223	ENST00000545153	IGKV2-24	A0A0C4DH68	120 aa		9.13	□□□□□ -0.95
PTPN6-223	ENST00000545153	CIRBP	Q14011	172 aa	Known RBP	9.13	□□□□□ -0.95
PTPN6-223	ENST00000545153		A0A087WYN8	130 aa		9.12	□□□□□ -0.95
PTPN6-223	ENST00000545153	LINC01549	A6NIU2	74 aa		9.12	□□□□□ -0.95
PTPN6-223	ENST00000545153	MAJIN	Q3KP22	176 aa		9.12	□□□□□ -0.95
PTPN6-223	ENST00000545153	SPACA4	Q8TDM5	124 aa		9.12	□□□□□ -0.95
PTPN6-223	ENST00000545153		A0A0J9YXV3	536 aa		9.11	□□□□□ -0.95
PTPN6-223	ENST00000545153	PLA2G1B	P04054	148 aa	Known RBP	9.11	□□□□□ -0.95
PTPN6-223	ENST00000545153	RAB5B	P61020	215 aa		9.11	□□□□□ -0.95
PTPN6-223	ENST00000545153	FAM19A3	Q7Z5A8	133 aa		9.11	□□□□□ -0.95
PTPN6-223	ENST00000545153		A0A096LNI7	61 aa		9.1	□□□□□ -0.95
PTPN6-223	ENST00000545153	LINC01561	Q8N1V8	128 aa		9.1	□□□□□ -0.95
PTPN6-223	ENST00000545153	CST9L	Q9H4G1	147 aa		9.1	□□□□□ -0.95
PTPN6-223	ENST00000545153		A0A096LNJ9	63 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	HERVK_113	P63121	156 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	SEC11A	P67812	179 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	GAGE2B	Q13066	116 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	KIAA0087	Q14695	138 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	PMCHL1	Q16048	86 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	C10orf25	Q5T742	122 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	UNQ6190/PRO20217	Q6UXQ8	127 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	GEMIN7	Q9H840	131 aa	Known RBP	9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	PKIG	Q9Y2B9	76 aa		9.09	□□□□□ -0.95
PTPN6-223	ENST00000545153	LOC107984640	A0A0U1RRK4	108 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153		F8WDY8	70 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153	PMVK	Q15126	192 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153	STPG4	Q8N801	248 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153	PLAC8	Q9NZF1	115 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153	CDKN2A-AS1	Q9UH64	79 aa		9.08	□□□□□ -0.96
PTPN6-223	ENST00000545153	NDUFA1	O15239	70 aa		9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	HBD	P02042	147 aa		9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	TRGC2	P03986	189 aa		9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	RNF151	Q2KHN1	245 aa		9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	MRPL35	Q9NZE8	188 aa	Known RBP	9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	LINC00474	Q9P2X8	69 aa		9.07	□□□□□ -0.96
PTPN6-223	ENST00000545153	TINCR	A0A1B0GVN0	87 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	COLCA2	A8K830	154 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	PTTG1IP	P53801	180 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	NDUFA6	P56556	154 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	PDZD11	Q5EBL8	140 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	TOMM7	Q9P0U1	55 aa		9.06	□□□□□ -0.96
PTPN6-223	ENST00000545153	PRSS2	P07478	247 aa		9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	KRTAP10-4	P60372	401 aa	Predicted RBP	9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	RPL37A	P61513	92 aa	Known RBP	9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	C6orf226	Q5I0X4	101 aa		9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	C2orf82	Q6UX34	121 aa		9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	LINC00469	Q8N7U9	141 aa		9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	CHCHD1	Q96BP2	118 aa	Known RBP	9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	PACRG	Q96M98	296 aa	Predicted RBP	9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	C6orf48	Q9UBA6	75 aa		9.05	□□□□□ -0.96
PTPN6-223	ENST00000545153	RPL18A	Q02543	176 aa	Known RBP	9.04	□□□□□ -0.96
PTPN6-223	ENST00000545153	BAGE3	Q86Y29	109 aa		9.04	□□□□□ -0.96
PTPN6-223	ENST00000545153	MYCBP2	O75592	4640 aa		9.03	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms