RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	POLA1	P09884	1462 aa	Predicted RBP	-0.75	□□□□□ -2.53
RAP1B-231	ENST00000544639	RYR2	Q92736	4967 aa		-0.75	□□□□□ -2.53
RAP1B-231	ENST00000544639	LRRC37A2	A6NM11	1700 aa		-0.75	□□□□□ -2.53
RAP1B-231	ENST00000544639	PRRC2C	Q9Y520	2896 aa	Known RBP	-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	PIGBOS1	A0A0B4J2F0	54 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	IFNG	P01579	166 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	COX8A	P10176	69 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	PDCD10	Q9BUL8	212 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	GRIN2A	Q12879	1464 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	UNC13A	Q9UPW8	1703 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	PATJ	Q8NI35	1801 aa		-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	TNRC18	O15417	2968 aa	Predicted RBP	-0.76	□□□□□ -2.53
RAP1B-231	ENST00000544639	GOLGA4	Q13439	2230 aa	Known RBP	-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	TRBV7-4	A0A0J9YYF1	115 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	CPSF4L	A6NMK7	179 aa	Known RBP	-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	APOC3	P02656	99 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	ARPC4	P59998	168 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639		Q6AWC8	147 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	BAGE2	Q86Y30	109 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	NAA60	Q9H7X0	242 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	NDUFA4L2	Q9NRX3	87 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	CUBN	O60494	3623 aa		-0.77	□□□□□ -2.53
RAP1B-231	ENST00000544639	ARAP2	Q8WZ64	1704 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	KDM5A	P29375	1690 aa	Known RBP	-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	ANKRD11	Q6UB99	2663 aa	Predicted RBP	-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	ARHGEF12	Q9NZN5	1544 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	PPIP5K1	Q6PFW1	1433 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639		F8VRH5	84 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	UQCR11	O14957	56 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	C9orf62	Q8N4C0	152 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	COPS9	Q8WXC6	57 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	TSLP	Q969D9	159 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	USMG5	Q96IX5	58 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	LAMA3	Q16787	3333 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	DNAH2	Q9P225	4427 aa		-0.78	□□□□□ -2.53
RAP1B-231	ENST00000544639	TEX15	Q9BXT5	2789 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	RNF213	Q63HN8	5207 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	HMGXB3	Q12766	1538 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	NIPBL	Q6KC79	2804 aa	eCLIP	-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	LINC00959	A0A1B0GUT2	108 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	IGLC7	A0M8Q6	106 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639		H0YGG7	62 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	TPPP2	P59282	170 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	H1FX-AS1	Q4G0G2	97 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	C12orf73	Q69YU5	71 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	PAIP2B	Q9ULR5	123 aa	Known RBP	-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	LINC01558	Q9Y6Z2	57 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	USP9X	Q93008	2570 aa	Predicted RBP	-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	PLEC	Q15149	4684 aa	Known RBP	-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	TULP4	Q9NRJ4	1543 aa		-0.79	□□□□□ -2.54
RAP1B-231	ENST00000544639	AKAP9	Q99996	3911 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	DOCK2	Q92608	1830 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	VPS13B	Q7Z7G8	4022 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	NBAS	A2RRP1	2371 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	FDCSP	Q8NFU4	85 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	KIAA0556	O60303	1618 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	WDR87	Q6ZQQ6	2873 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	MGAM2	Q2M2H8	2515 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	CFTR	P13569	1480 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	SHANK2	Q9UPX8	1470 aa		-0.8	□□□□□ -2.54
RAP1B-231	ENST00000544639	PTPN23	Q9H3S7	1636 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	ADAMTS12	P58397	1594 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	SETBP1	Q9Y6X0	1596 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	TRBV7-3	A0A075B6L6	115 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639		H3BNG1	76 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	HMGN4	O00479	90 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	LYST	Q99698	3801 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	RERGL	Q9H628	205 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	SERP1	Q9Y6X1	66 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	SLIT1	O75093	1534 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	KIF21A	Q7Z4S6	1674 aa		-0.81	□□□□□ -2.54
RAP1B-231	ENST00000544639	SSSCA1	O60232	199 aa		-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	SFT2D2	O95562	160 aa		-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	UBA52	P62987	128 aa	Known RBP	-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	C10orf113	Q5VZT2	155 aa		-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	TMEM263	Q8WUH6	116 aa	Known RBP	-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	MGST2	Q99735	147 aa		-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	DYNLRB1	Q9NP97	96 aa		-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	UTP20	O75691	2785 aa	Known RBP	-0.82	□□□□□ -2.54
RAP1B-231	ENST00000544639	DMXL1	Q9Y485	3027 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	RIMS1	Q86UR5	1692 aa	Known RBP	-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	MGP	P08493	103 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	UBE2D3	P61077	147 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	UBE2D2	P62837	147 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	LINC01600	Q96MT4	127 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	SNRNP25	Q9BV90	132 aa	Known RBP	-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	CRIPT	Q9P021	101 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	LINC00474	Q9P2X8	69 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	TRO	Q12816	1431 aa	Predicted RBP	-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	TRANK1	O15050	2925 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	ANK3	Q12955	4377 aa	Known RBP	-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	KNL1	Q8NG31	2342 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	DNAH11	Q96DT5	4516 aa		-0.83	□□□□□ -2.54
RAP1B-231	ENST00000544639	COL4A6	Q14031	1691 aa		-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	MAGI1	Q96QZ7	1491 aa	Predicted RBP	-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	MT1H	P80294	61 aa		-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	DEFA5	Q01523	94 aa		-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	FAIM	Q9NVQ4	179 aa		-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	DSP	P15924	2871 aa	Known RBP	-0.84	□□□□□ -2.54
RAP1B-231	ENST00000544639	FMN2	Q9NZ56	1722 aa		-0.84	□□□□□ -2.54

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