RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 C19orf12Q9NSK7 152 aa0.24□□□□□ -2.37
YBX3-214ENST00000544501 LYRM2Q9NU23 88 aaPredicted RBP0.24□□□□□ -2.37
YBX3-214ENST00000544501 TMEM14BQ9NUH8 114 aa0.24□□□□□ -2.37
YBX3-214ENST00000544501 GID8Q9NWU2 228 aa0.24□□□□□ -2.37
YBX3-214ENST00000544501 TRAV27A0A087WT01 109 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 ZNF727A8MUV8 499 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 G3V318 75 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 GPR31O00270 319 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 LYRM1O43325 122 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 PITX3O75364 302 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 RBP4P02753 201 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 FABP2P12104 132 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 CCL3L1P16619 93 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 EVI2AP22794 236 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 SDC4P31431 198 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 ZNF137PP52743 207 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 TPPP2P59282 170 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 FXYD4P59646 89 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 HBBP68871 147 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 MIR22HGQ0VDD5 57 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 DIAPH2-AS1Q14236 149 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 LTC4SQ16873 150 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 PPP1R2P3Q6NXS1 205 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 GLIPR1L1Q6UWM5 242 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 Q6ZQY7 126 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 FAM24BQ8N5W8 94 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 OR10AC1Q8NH08 325 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 AP3S1Q92572 193 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 TEX37Q96LM6 180 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 GAFA1Q96PS6 74 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 PCBD2Q9H0N5 130 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 TPRKBQ9Y3C4 175 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 RNF11Q9Y3C5 154 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 ASB4Q9Y574 426 aa0.23□□□□□ -2.37
YBX3-214ENST00000544501 LOC107984156A0A0G2JMH3 177 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 A0A0J9YY99 117 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 C3orf85A0A1B0GTC6 90 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 OOSP1A8MZH6 123 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CCL22O00626 93 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CST7O76096 145 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CBLN1P23435 193 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 RPL22P35268 128 aaKnown RBP0.22□□□□□ -2.37
YBX3-214ENST00000544501 RPL35P42766 123 aaKnown RBP0.22□□□□□ -2.37
YBX3-214ENST00000544501 RTL8BQ17RB0 113 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 SPINK9Q5DT21 86 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 Q5VV11 94 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 C1orf140Q5VVS0 124 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CASC2Q6XLA1 102 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 FOXI2Q6ZQN5 318 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 TMED4Q7Z7H5 227 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 WFDC10BQ8IUB3 73 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 ARL17AQ8IVW1 177 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 C4orf33Q8N1A6 199 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 C10orf111Q8N326 155 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 STX19Q8N4C7 294 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 OR9Q1Q8NGQ5 310 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 OR10AG1Q8NH19 301 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 TSKUQ8WUA8 353 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 DIRC1Q969H9 104 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CCDC115Q96NT0 180 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 PRRT1Q99946 306 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 AIF1LQ9BQI0 150 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 WFDC6Q9BQY6 131 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 SNRNP25Q9BV90 132 aaKnown RBP0.22□□□□□ -2.37
YBX3-214ENST00000544501 RTL8AQ9BWD3 113 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 CST11Q9H112 138 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 NAT8BQ9UHF3 227 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 NDUFAF1Q9Y375 327 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 UFC1Q9Y3C8 167 aa0.22□□□□□ -2.37
YBX3-214ENST00000544501 A0A087WSZ3 146 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 A0A096LPF7 62 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 A0A0D9SG42 100 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 LOC285095A0A1B0GVY8 99 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 IQCF6A8MYZ5 107 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 H3BNG1 76 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 H3BUA1 57 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 GABARAPH6UMI1 98 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 PIPP12273 146 aaPredicted RBP0.21□□□□□ -2.38
YBX3-214ENST00000544501 FABP4P15090 132 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 RPS3P23396 243 aaKnown RBP eCLIP0.21□□□□□ -2.38
YBX3-214ENST00000544501 SERPINB1P30740 379 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 DEFA5Q01523 94 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 NCBP2-AS2Q69YL0 99 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 OR2T2Q6IF00 324 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 C3orf62Q6ZUJ4 267 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 TMEM35BQ8NCS4 154 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 OR5H6Q8NGV6 325 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 CLEC2BQ92478 149 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 LEAP2Q969E1 77 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 AP1S3Q96PC3 154 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 EFCAB11Q9BUY7 163 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 OR2H1Q9GZK4 316 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 SH3BGRL3Q9H299 93 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 TAF9BQ9HBM6 251 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 OTORQ9NRC9 128 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 FKBP11Q9NYL4 201 aa0.21□□□□□ -2.38
YBX3-214ENST00000544501 NOP16Q9Y3C1 178 aaKnown RBP0.21□□□□□ -2.38
YBX3-214ENST00000544501 LOC107986453A0A1B0GWG9 222 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 C20orf202A1L168 122 aa0.2□□□□□ -2.38
YBX3-214ENST00000544501 H3BQV1 296 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms