RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 RPL39P62891 51 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-212ENST00000543368 COX6A2Q02221 97 aa6.56□□□□□ -1.36
NPIPB3-212ENST00000543368 Q6ZN92 141 aa6.56□□□□□ -1.36
NPIPB3-212ENST00000543368 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
NPIPB3-212ENST00000543368 CYSLTR1Q9Y271 337 aa6.56□□□□□ -1.36
NPIPB3-212ENST00000543368 LOC107984640A0A0U1RRK4 108 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 KRTAP29-1A8MX34 341 aaPredicted RBP6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 OXTP01178 125 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 IFITM2Q01629 132 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 RNF151Q2KHN1 245 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 CAMK2N2Q96S95 79 aa6.55□□□□□ -1.36
NPIPB3-212ENST00000543368 LOC389332A0A1B0GUA5 103 aa6.54□□□□□ -1.36
NPIPB3-212ENST00000543368 ADCYAP1P18509 176 aa6.54□□□□□ -1.36
NPIPB3-212ENST00000543368 RHEBQ15382 184 aa6.54□□□□□ -1.36
NPIPB3-212ENST00000543368 COMMD7Q86VX2 200 aa6.54□□□□□ -1.36
NPIPB3-212ENST00000543368 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
NPIPB3-212ENST00000543368 IGHV3OR16-9A0A0B4J2B5 98 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 PANO1I0J062 215 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 MT-ND6P03923 174 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 LORP23490 312 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 SEC11AP67812 179 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 SPAG11BQ08648 103 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 C5orf38Q86SI9 138 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 STPG4Q8N801 248 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 GNB1LQ9BYB4 327 aa6.53□□□□□ -1.36
NPIPB3-212ENST00000543368 IGLV4-3A0A075B6K6 122 aa6.52□□□□□ -1.37
NPIPB3-212ENST00000543368 NDUFA1O15239 70 aa6.52□□□□□ -1.37
NPIPB3-212ENST00000543368 CHTF8P0CG12 524 aa6.52□□□□□ -1.37
NPIPB3-212ENST00000543368 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
NPIPB3-212ENST00000543368 VCX2Q9H322 139 aa6.52□□□□□ -1.37
NPIPB3-212ENST00000543368 A0A087WZ39 114 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 A0A096LNI7 61 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 PTTG1IPP53801 180 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 NDUFA5Q16718 116 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 C10orf91Q5T1B1 145 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 Q6ZRU5 148 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 TIMM17AQ99595 171 aa6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 CARHSP1Q9Y2V2 147 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-212ENST00000543368 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
NPIPB3-212ENST00000543368 LINC00526Q96FQ7 95 aa6.5□□□□□ -1.37
NPIPB3-212ENST00000543368 AMELXQ99217 191 aa6.5□□□□□ -1.37
NPIPB3-212ENST00000543368 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-212ENST00000543368 UBE2D1P51668 147 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 GAGE2BQ13066 116 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 LINC00242Q5T6M2 205 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 TOMM6Q96B49 74 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 RPS10P5Q9NQ39 176 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
NPIPB3-212ENST00000543368 IGIPA6NJ69 53 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 PRSS2P07478 247 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 HERVK_113P63121 156 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 RPL18AQ02543 176 aaKnown RBP6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 ERASQ7Z444 233 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 FAM19A3Q7Z5A8 133 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 FAT1Q14517 4588 aa6.48□□□□□ -1.37
NPIPB3-212ENST00000543368 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 TRBV30A0A0K0K1B3 111 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 SNAPINO95295 136 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 TLX1NBP0CAT3 122 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 KIAA1644Q3SXP7 199 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 FA2HQ7L5A8 372 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 SVBPQ8N300 66 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 PACRGQ96M98 296 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 ALKBH7Q9BT30 221 aaPredicted RBP6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 GEMIN7Q9H840 131 aaKnown RBP6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 SMCO4Q9NRQ5 59 aa6.47□□□□□ -1.37
NPIPB3-212ENST00000543368 LINC01546A6NGU7 62 aa6.46□□□□□ -1.38
NPIPB3-212ENST00000543368 Q6ZRP5 223 aa6.46□□□□□ -1.38
NPIPB3-212ENST00000543368 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.38
NPIPB3-212ENST00000543368 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
NPIPB3-212ENST00000543368 CXCL5P42830 114 aa6.45□□□□□ -1.38
NPIPB3-212ENST00000543368 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
NPIPB3-212ENST00000543368 SERTAD4-AS1Q5TG53 156 aa6.45□□□□□ -1.38
NPIPB3-212ENST00000543368 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
NPIPB3-212ENST00000543368 APOC3P02656 99 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 RAB5BP61020 215 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 CKS1BP61024 79 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 C9orf116Q5BN46 136 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 LINC00173Q6ZV60 143 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 Q8IZM0 81 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 TRAPPC1Q9Y5R8 145 aa6.44□□□□□ -1.38
NPIPB3-212ENST00000543368 TINCRA0A1B0GVN0 87 aa6.43□□□□□ -1.38
NPIPB3-212ENST00000543368 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
NPIPB3-212ENST00000543368 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
NPIPB3-212ENST00000543368 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms