RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
DDX55-210ENST00000543016 COX7A2LO14548 114 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 LEPROTL1O95214 131 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 APOMO95445 188 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 HERVK_113P63121 156 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 LINC00242Q5T6M2 205 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 CDPF1Q6NVV7 123 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 LINC01561Q8N1V8 128 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 FAM19A2Q8N3H0 131 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 Q8N814 137 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 IFI27L1Q96BM0 104 aa8.04□□□□□ -1.12
DDX55-210ENST00000543016 TRAV12-1A0A0B4J245 112 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 IGHV3OR16-9A0A0B4J2B5 98 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 IGHV1-58A0A0C4DH39 117 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 MALP21145 153 aa8.03□□□□□ -1.12
DDX55-210ENST00000543016 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
DDX55-210ENST00000543016 TINCRA0A1B0GVN0 87 aa8.02□□□□□ -1.13
DDX55-210ENST00000543016 NUPR1O60356 82 aa8.02□□□□□ -1.13
DDX55-210ENST00000543016 PRSS1P07477 247 aa8.02□□□□□ -1.13
DDX55-210ENST00000543016 NDUFA6P56556 154 aa8.02□□□□□ -1.13
DDX55-210ENST00000543016 A0A087WZ39 114 aa8.01□□□□□ -1.13
DDX55-210ENST00000543016 DNAH2Q9P225 4427 aa8.01□□□□□ -1.13
DDX55-210ENST00000543016 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
DDX55-210ENST00000543016 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
DDX55-210ENST00000543016 LECT2O14960 151 aa8□□□□□ -1.13
DDX55-210ENST00000543016 WFDC2Q14508 124 aa8□□□□□ -1.13
DDX55-210ENST00000543016 ZC2HC1BQ5TFG8 222 aa8□□□□□ -1.13
DDX55-210ENST00000543016 DNAH17Q9UFH2 4485 aa8□□□□□ -1.13
DDX55-210ENST00000543016 IGLV5-45A0A087WSX0 123 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 A0A0J9YXV3 536 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 F8WDY8 70 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 S100A6P06703 90 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 SPATA12Q7Z6I5 190 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 C5orf38Q86SI9 138 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 C15orf56Q8N910 161 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 OR10D4PQ8NGN7 298 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 MAP1LC3CQ9BXW4 147 aa7.99□□□□□ -1.13
DDX55-210ENST00000543016 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
DDX55-210ENST00000543016 H3BRM9 83 aa7.98□□□□□ -1.13
DDX55-210ENST00000543016 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
DDX55-210ENST00000543016 FABP4P15090 132 aa7.98□□□□□ -1.13
DDX55-210ENST00000543016 COX6A2Q02221 97 aa7.98□□□□□ -1.13
DDX55-210ENST00000543016 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
DDX55-210ENST00000543016 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
DDX55-210ENST00000543016 IGLV5-52A0A0A0MRZ9 124 aa7.97□□□□□ -1.13
DDX55-210ENST00000543016 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.97□□□□□ -1.13
DDX55-210ENST00000543016 F8VRH5 84 aa7.97□□□□□ -1.13
DDX55-210ENST00000543016 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
DDX55-210ENST00000543016 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
DDX55-210ENST00000543016 KRTAP10-2P60368 255 aa7.96□□□□□ -1.14
DDX55-210ENST00000543016 C2orf48Q96LS8 159 aa7.96□□□□□ -1.14
DDX55-210ENST00000543016 CHAC1Q9BUX1 264 aa7.96□□□□□ -1.14
DDX55-210ENST00000543016 CDKN2A-AS1Q9UH64 79 aa7.96□□□□□ -1.14
DDX55-210ENST00000543016 PKIGQ9Y2B9 76 aa7.96□□□□□ -1.14
DDX55-210ENST00000543016 IGLV4-69A0A075B6H9 119 aa7.95□□□□□ -1.14
DDX55-210ENST00000543016 ORAOV1Q8WV07 137 aa7.95□□□□□ -1.14
DDX55-210ENST00000543016 FAT2Q9NYQ8 4349 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
DDX55-210ENST00000543016 C16orf90A8MZG2 172 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 PLNP26678 52 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 S100A2P29034 98 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 AKR1D1P51857 326 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 SPAG11BQ08648 103 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 ODF1Q14990 250 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 HIGD2BQ4VC39 106 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 PET117Q6UWS5 81 aa7.94□□□□□ -1.14
DDX55-210ENST00000543016 MRPL35Q9NZE8 188 aaKnown RBP7.94□□□□□ -1.14
DDX55-210ENST00000543016 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
DDX55-210ENST00000543016 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
DDX55-210ENST00000543016 PRSS2P07478 247 aa7.93□□□□□ -1.14
DDX55-210ENST00000543016 GCSHP23434 173 aa7.93□□□□□ -1.14
DDX55-210ENST00000543016 C9orf163Q8N9P6 203 aa7.93□□□□□ -1.14
DDX55-210ENST00000543016 DPM2O94777 84 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 ZNF22P17026 224 aaPredicted RBP7.92□□□□□ -1.14
DDX55-210ENST00000543016 CXCL5P42830 114 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 TMEM170BQ5T4T1 132 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 Q8IZM0 81 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 HIST3H2BBQ8N257 126 aa7.92□□□□□ -1.14
DDX55-210ENST00000543016 C5orf52A6NGY3 159 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 SMIM1B2RUZ4 78 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 H0Y8G0 127 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 NDUFA1O15239 70 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 RNF151Q2KHN1 245 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 CAMK2N2Q96S95 79 aa7.91□□□□□ -1.14
DDX55-210ENST00000543016 IGLV5-39A0A0G2JS06 123 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 C20orf202A1L168 122 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 SLPIP03973 132 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 CKS1BP61024 79 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 SNRPEP62304 92 aaKnown RBP7.9□□□□□ -1.14
DDX55-210ENST00000543016 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
DDX55-210ENST00000543016 HIST1H2BLQ99880 126 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms