RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 RPRMLQ8N4K4 120 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 C15orf53Q8NAA6 179 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 ODF3Q96PU9 254 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 MGST2Q99735 147 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 AGPAT4-IT1Q9H0P7 198 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 NCKAP5O14513 1909 aa2.36□□□□□ -2.03
SFSWAP-211ENST00000542813 ABCA4P78363 2273 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 PKDREJQ9NTG1 2253 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 CEP192Q8TEP8 1941 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 HIVEP2P31629 2446 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 IGLV4-60A0A075B6I1 120 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 TRAV40A0A0B4J280 105 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 A0A0J9YW62 118 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 SPTY2D1-AS1A0A0U1RR47 76 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 RBAKDNA6NC62 111 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 K7ERJ3 54 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 M0R135 149 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 NPYP01303 97 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 IGHV3-53P01767 116 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 P0DMU3 169 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM231AP0DMU4 169 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 FAM231CP0DMU5 169 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 CCL4P13236 92 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 UBE2D3P61077 147 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 UBE2D2P62837 147 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 C10orf128Q5T292 105 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 KPRPQ5T749 579 aaPredicted RBP2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 MIR17HGQ75NE6 70 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 DAND5Q8N907 189 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 BORCS8Q96FH0 119 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 NHP2Q9NX24 153 aaKnown RBP2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 LAMTOR3Q9UHA4 124 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 ZNF469Q96JG9 3925 aaPredicted RBP2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 TGP01266 2768 aa2.35□□□□□ -2.03
SFSWAP-211ENST00000542813 RTTNQ86VV8 2226 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 TNRC6AQ8NDV7 1962 aaKnown RBP2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKV1D-37A0A075B6S9 117 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 TRAV12-2A0A075B6T6 113 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 MYMXA0A1B0GTQ4 84 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 K7EMI3 77 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 ATOX1O00244 68 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 UBE2L6O14933 153 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 IGKCP01834 107 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 ACYP1P07311 99 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 PYYP10082 97 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 DEFB121Q5J5C9 76 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 C3orf56Q8N813 242 aa2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 RNASE6Q93091 150 aaKnown RBP2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 KLK5Q9Y337 293 aaPredicted RBP2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 COL27A1Q8IZC6 1860 aaPredicted RBP2.34□□□□□ -2.03
SFSWAP-211ENST00000542813 EML6Q6ZMW3 1958 aa2.34□□□□□ -2.04
SFSWAP-211ENST00000542813 VPS13CQ709C8 3753 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 SDK2Q58EX2 2172 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 TRBV25-1A0A075B6N4 114 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 IGLV3-32A0A0A0MS00 114 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 IGHV3-15A0A0B4J1V0 119 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 TRAV17A0A0B4J275 112 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 A0A1B0GW54 56 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 COX6A1P12074 109 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 SLC25A16P16260 332 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 FKBP2P26885 142 aaKnown RBP2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 CCL8P80075 99 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 VMA21Q3ZAQ7 101 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 LINC00322Q6ZN03 302 aaPredicted RBP2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 LINC00643Q86TS7 51 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 LINC00311Q8N616 119 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 COPS9Q8WXC6 57 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 TRGV9Q99603 122 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 UPK3BQ9BT76 320 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 EPDR1Q9UM22 224 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 SERP1Q9Y6X1 66 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 MED12LQ86YW9 2145 aa2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 DIDO1Q9BTC0 2240 aaKnown RBP2.33□□□□□ -2.04
SFSWAP-211ENST00000542813 MED12Q93074 2177 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 ZNF407Q9C0G0 2248 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 TRBV7-3A0A075B6L6 115 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 TRAV3A0A0B4J244 114 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 C19orf71A6NCJ1 209 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 HIGD1CA8MV81 97 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 TCL1BO95988 128 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 UBE2D1P51668 147 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 ZNF137PP52743 207 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 EFNA4P52798 201 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 NPC2P61916 151 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 HIST1H4AP62805 103 aaKnown RBP2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 HBBP68871 147 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 FAM27BQ5VT28 67 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 C5orf38Q86SI9 138 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 KRTAP11-1Q8IUC1 163 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 SPTSSAQ969W0 71 aa2.32□□□□□ -2.04
SFSWAP-211ENST00000542813 IFI27L1Q96BM0 104 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms