RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 UBE2D4Q9Y2X8 147 aa12.31□□□□□ -0.44
NELFA-216ENST00000542778 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
NELFA-216ENST00000542778 KIR2DL5BQ8NHK3 375 aa12.3□□□□□ -0.44
NELFA-216ENST00000542778 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
NELFA-216ENST00000542778 RPL18AQ02543 176 aaKnown RBP12.3□□□□□ -0.44
NELFA-216ENST00000542778 TMEM258P61165 79 aa12.29□□□□□ -0.44
NELFA-216ENST00000542778 SOSTDC1Q6X4U4 206 aa12.29□□□□□ -0.44
NELFA-216ENST00000542778 IGKV3-20P01619 116 aa12.29□□□□□ -0.44
NELFA-216ENST00000542778 CHCHD7Q9BUK0 85 aa12.29□□□□□ -0.44
NELFA-216ENST00000542778 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 TRAV13-1A0A0B4J241 112 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 DEFB136Q30KP8 78 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 A0A0U1RRA0 63 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 PROK1P58294 105 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 Q9H8V8 135 aa12.28□□□□□ -0.44
NELFA-216ENST00000542778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.27□□□□□ -0.45
NELFA-216ENST00000542778 IGKV2-29A2NJV5 120 aaPredicted RBP12.27□□□□□ -0.45
NELFA-216ENST00000542778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.27□□□□□ -0.45
NELFA-216ENST00000542778 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
NELFA-216ENST00000542778 WNK1Q9H4A3 2382 aa12.27□□□□□ -0.45
NELFA-216ENST00000542778 IGLV5-45A0A087WSX0 123 aa12.27□□□□□ -0.45
NELFA-216ENST00000542778 ZNF625Q96I27 306 aaPredicted RBP12.27□□□□□ -0.45
NELFA-216ENST00000542778 SETXQ7Z333 2677 aaKnown RBP12.26□□□□□ -0.45
NELFA-216ENST00000542778 OXTP01178 125 aa12.26□□□□□ -0.45
NELFA-216ENST00000542778 MALP21145 153 aa12.26□□□□□ -0.45
NELFA-216ENST00000542778 SERP2Q8N6R1 65 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 COPS9Q8WXC6 57 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 Q9HAA7 133 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 Q9UF83 564 aa12.25□□□□□ -0.45
NELFA-216ENST00000542778 DNAJC9-AS1A6NH13 148 aa12.24□□□□□ -0.45
NELFA-216ENST00000542778 RS1O15537 224 aa12.24□□□□□ -0.45
NELFA-216ENST00000542778 PRIMA1Q86XR5 153 aa12.24□□□□□ -0.45
NELFA-216ENST00000542778 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
NELFA-216ENST00000542778 SYNJ2BPP57105 145 aa12.23□□□□□ -0.45
NELFA-216ENST00000542778 C11orf44Q8N8P7 122 aa12.23□□□□□ -0.45
NELFA-216ENST00000542778 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
NELFA-216ENST00000542778 IGKV3D-7A0A0C4DH55 119 aa12.22□□□□□ -0.45
NELFA-216ENST00000542778 COX6A2Q02221 97 aa12.22□□□□□ -0.45
NELFA-216ENST00000542778 DNAL4O96015 105 aa12.22□□□□□ -0.45
NELFA-216ENST00000542778 Q6JHZ5 121 aa12.22□□□□□ -0.45
NELFA-216ENST00000542778 HIVEP2P31629 2446 aa12.21□□□□□ -0.45
NELFA-216ENST00000542778 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
NELFA-216ENST00000542778 SLURP1P55000 103 aa12.2□□□□□ -0.46
NELFA-216ENST00000542778 A0A087WVE0 104 aa12.2□□□□□ -0.46
NELFA-216ENST00000542778 HOXD3P31249 432 aaPredicted RBP12.2□□□□□ -0.46
NELFA-216ENST00000542778 C4orf26Q17RF5 130 aa12.2□□□□□ -0.46
NELFA-216ENST00000542778 HIVEP1P15822 2718 aa12.19□□□□□ -0.46
NELFA-216ENST00000542778 KHDC1LQ5JSQ8 128 aa12.19□□□□□ -0.46
NELFA-216ENST00000542778 C9orf129Q5T035 196 aaKnown RBP12.19□□□□□ -0.46
NELFA-216ENST00000542778 Q6ZSN1 163 aa12.19□□□□□ -0.46
NELFA-216ENST00000542778 K7EMT4 169 aa12.19□□□□□ -0.46
NELFA-216ENST00000542778 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
NELFA-216ENST00000542778 Q5XG85 94 aa12.18□□□□□ -0.46
NELFA-216ENST00000542778 LINC01561Q8N1V8 128 aa12.18□□□□□ -0.46
NELFA-216ENST00000542778 C14orf132Q9NPU4 83 aa12.18□□□□□ -0.46
NELFA-216ENST00000542778 LINC00846Q9NV44 126 aa12.18□□□□□ -0.46
NELFA-216ENST00000542778 FLNBO75369 2602 aaKnown RBP12.18□□□□□ -0.46
NELFA-216ENST00000542778 RPL28P46779 137 aaKnown RBP12.18□□□□□ -0.46
NELFA-216ENST00000542778 IGHV3-38A0A0C4DH36 116 aa12.17□□□□□ -0.46
NELFA-216ENST00000542778 USP17L23D6RBM5 183 aa12.17□□□□□ -0.46
NELFA-216ENST00000542778 UBE2E2Q96LR5 201 aa12.17□□□□□ -0.46
NELFA-216ENST00000542778 IGHV3OR16-12A0A075B7B8 117 aa12.17□□□□□ -0.46
NELFA-216ENST00000542778 SNRPD3P62318 126 aaKnown RBP12.17□□□□□ -0.46
NELFA-216ENST00000542778 LINC00242Q5T6M2 205 aa12.17□□□□□ -0.46
NELFA-216ENST00000542778 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 RBMY1A1P0DJD3 496 aaKnown RBP12.16□□□□□ -0.46
NELFA-216ENST00000542778 RBMY1CP0DJD4 496 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 RBMY1FQ15415 496 aaKnown RBP12.16□□□□□ -0.46
NELFA-216ENST00000542778 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 RNF152Q8N8N0 203 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 NSD1Q96L73 2696 aaPredicted RBP12.16□□□□□ -0.46
NELFA-216ENST00000542778 TMEM89A2RUT3 159 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 HRCT1Q6UXD1 115 aa12.16□□□□□ -0.46
NELFA-216ENST00000542778 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
NELFA-216ENST00000542778 A0A1W2PRX2 142 aa12.15□□□□□ -0.46
NELFA-216ENST00000542778 HTN1P15515 57 aa12.15□□□□□ -0.46
NELFA-216ENST00000542778 OBSCN-AS1Q96MR7 158 aa12.15□□□□□ -0.46
NELFA-216ENST00000542778 A0A087WYN8 130 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 F5H768 121 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 TRAV13-2A0A0B4J235 113 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 K7EQG2 157 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 PF4P02776 101 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
NELFA-216ENST00000542778 OVOL2Q9BRP0 275 aa12.13□□□□□ -0.47
NELFA-216ENST00000542778 CRPP02741 224 aa12.13□□□□□ -0.47
NELFA-216ENST00000542778 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
NELFA-216ENST00000542778 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
NELFA-216ENST00000542778 PRM2P04554 102 aa12.11□□□□□ -0.47
NELFA-216ENST00000542778 FAM19A3Q7Z5A8 133 aa12.11□□□□□ -0.47
NELFA-216ENST00000542778 LY6G6DO95868 133 aa12.1□□□□□ -0.47
NELFA-216ENST00000542778 FHL2Q14192 279 aa12.1□□□□□ -0.47
NELFA-216ENST00000542778 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
NELFA-216ENST00000542778 TENM1Q9UKZ4 2725 aa12.1□□□□□ -0.47
NELFA-216ENST00000542778 IGKV2-28A0A075B6P5 120 aa12.09□□□□□ -0.47
NELFA-216ENST00000542778 IGKV2D-28P01615 120 aa12.09□□□□□ -0.47
NELFA-216ENST00000542778 VWFP04275 2813 aa12.09□□□□□ -0.47
NELFA-216ENST00000542778 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms