RNA–Protein interactions for RNA: ENST00000542602.1

PSMD9-208, Transcript of proteasome 26S subunit, non-ATPase 9, human

TSL 3 BASIC

Gene PSMD9, Length 516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD9-208	ENST00000542602	C2orf66	Q6UXQ4	117 aa		12.1	□□□□□ -0.47
PSMD9-208	ENST00000542602	PRSS3P2	Q8NHM4	247 aa		12.1	□□□□□ -0.47
PSMD9-208	ENST00000542602	SPACA4	Q8TDM5	124 aa		12.1	□□□□□ -0.47
PSMD9-208	ENST00000542602	C2orf48	Q96LS8	159 aa		12.1	□□□□□ -0.47
PSMD9-208	ENST00000542602	LINC00474	Q9P2X8	69 aa		12.1	□□□□□ -0.47
PSMD9-208	ENST00000542602	IGLV4-69	A0A075B6H9	119 aa		12.09	□□□□□ -0.47
PSMD9-208	ENST00000542602	IGLV4-3	A0A075B6K6	122 aa		12.09	□□□□□ -0.47
PSMD9-208	ENST00000542602	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.09	□□□□□ -0.47
PSMD9-208	ENST00000542602	MT-ND6	P03923	174 aa		12.09	□□□□□ -0.47
PSMD9-208	ENST00000542602	LINC00526	Q96FQ7	95 aa		12.09	□□□□□ -0.47
PSMD9-208	ENST00000542602		A0A087WYN8	130 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602		F8WDY8	70 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	CHTF8	P0CG12	524 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	NDUFA5	Q16718	116 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602		Q6ZN92	141 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	TEX43	Q6ZNM6	134 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	OR10D4P	Q8NGN7	298 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	VCX2	Q9H322	139 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	PLAC8	Q9NZF1	115 aa		12.08	□□□□□ -0.48
PSMD9-208	ENST00000542602	PAPPA-AS1	Q5QFB9	102 aa		12.07	□□□□□ -0.48
PSMD9-208	ENST00000542602	C2orf88	Q9BSF0	95 aa		12.07	□□□□□ -0.48
PSMD9-208	ENST00000542602	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.06	□□□□□ -0.48
PSMD9-208	ENST00000542602	RPL37A	P61513	92 aa	Known RBP	12.06	□□□□□ -0.48
PSMD9-208	ENST00000542602	MAJIN	Q3KP22	176 aa		12.06	□□□□□ -0.48
PSMD9-208	ENST00000542602	CAMK2N2	Q96S95	79 aa		12.06	□□□□□ -0.48
PSMD9-208	ENST00000542602	IGKV2-24	A0A0C4DH68	120 aa		12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	LINC01549	A6NIU2	74 aa		12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	IGIP	A6NJ69	53 aa		12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	APOC3	P02656	99 aa		12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	FABP9	Q0Z7S8	132 aa		12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	ALKBH7	Q9BT30	221 aa	Predicted RBP	12.05	□□□□□ -0.48
PSMD9-208	ENST00000542602	SNAPIN	O95295	136 aa		12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602	KRTAP10-4	P60372	401 aa	Predicted RBP	12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602	SPAG11B	Q08648	103 aa		12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602	LINC00242	Q5T6M2	205 aa		12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602	SVBP	Q8N300	66 aa		12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602	AMELX	Q99217	191 aa		12.04	□□□□□ -0.48
PSMD9-208	ENST00000542602		A0A087WZ39	114 aa		12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602	RNF151	Q2KHN1	245 aa		12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602		Q6ZRU5	148 aa		12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602	ORAOV1	Q8WV07	137 aa		12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602	TOMM6	Q96B49	74 aa		12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602	MRPL18	Q9H0U6	180 aa	Known RBP	12.03	□□□□□ -0.48
PSMD9-208	ENST00000542602		A0A096LNI7	61 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	LOC107984640	A0A0U1RRK4	108 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	UBE2D1	P51668	147 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	LINC01561	Q8N1V8	128 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	STPG4	Q8N801	248 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	TIMM17A	Q99595	171 aa		12.02	□□□□□ -0.49
PSMD9-208	ENST00000542602	LINC01546	A6NGU7	62 aa		12.01	□□□□□ -0.49
PSMD9-208	ENST00000542602	SEC11A	P67812	179 aa		12.01	□□□□□ -0.49
PSMD9-208	ENST00000542602	C7orf33	Q8WU49	177 aa		12.01	□□□□□ -0.49
PSMD9-208	ENST00000542602	MYCBP2	O75592	4640 aa		12.01	□□□□□ -0.49
PSMD9-208	ENST00000542602	ERAS	Q7Z444	233 aa		12	□□□□□ -0.49
PSMD9-208	ENST00000542602	MRPL35	Q9NZE8	188 aa	Known RBP	12	□□□□□ -0.49
PSMD9-208	ENST00000542602	FLG2	Q5D862	2391 aa	Predicted RBP	12	□□□□□ -0.49
PSMD9-208	ENST00000542602	FAM19A3	Q7Z5A8	133 aa		11.99	□□□□□ -0.49
PSMD9-208	ENST00000542602	SCGB3A1	Q96QR1	104 aa		11.99	□□□□□ -0.49
PSMD9-208	ENST00000542602	NDUFA1	O15239	70 aa		11.98	□□□□□ -0.49
PSMD9-208	ENST00000542602	PTTG1IP	P53801	180 aa		11.98	□□□□□ -0.49
PSMD9-208	ENST00000542602	LINC00173	Q6ZV60	143 aa		11.98	□□□□□ -0.49
PSMD9-208	ENST00000542602	FA2H	Q7L5A8	372 aa		11.98	□□□□□ -0.49
PSMD9-208	ENST00000542602	TRAPPC1	Q9Y5R8	145 aa		11.98	□□□□□ -0.49
PSMD9-208	ENST00000542602	GAGE2B	Q13066	116 aa		11.97	□□□□□ -0.49
PSMD9-208	ENST00000542602	SMCO4	Q9NRQ5	59 aa		11.97	□□□□□ -0.49
PSMD9-208	ENST00000542602	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.96	□□□□□ -0.49
PSMD9-208	ENST00000542602	ZC2HC1B	Q5TFG8	222 aa		11.96	□□□□□ -0.49
PSMD9-208	ENST00000542602	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.95	□□□□□ -0.5
PSMD9-208	ENST00000542602		J3QL48	77 aa		11.95	□□□□□ -0.5
PSMD9-208	ENST00000542602	HERVK_113	P63121	156 aa		11.95	□□□□□ -0.5
PSMD9-208	ENST00000542602	KIAA0087	Q14695	138 aa		11.94	□□□□□ -0.5
PSMD9-208	ENST00000542602	GEMIN7	Q9H840	131 aa	Known RBP	11.94	□□□□□ -0.5
PSMD9-208	ENST00000542602	HERC1	Q15751	4861 aa		11.93	□□□□□ -0.5
PSMD9-208	ENST00000542602	OXT	P01178	125 aa		11.93	□□□□□ -0.5
PSMD9-208	ENST00000542602	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.93	□□□□□ -0.5
PSMD9-208	ENST00000542602	PRSS2	P07478	247 aa		11.92	□□□□□ -0.5
PSMD9-208	ENST00000542602	RPL18A	Q02543	176 aa	Known RBP	11.92	□□□□□ -0.5
PSMD9-208	ENST00000542602	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.92	□□□□□ -0.5
PSMD9-208	ENST00000542602		A0A0J9YXV3	536 aa		11.91	□□□□□ -0.5
PSMD9-208	ENST00000542602	LINC00614	P0C842	121 aa		11.91	□□□□□ -0.5
PSMD9-208	ENST00000542602	TLX1NB	P0CAT3	122 aa		11.91	□□□□□ -0.5
PSMD9-208	ENST00000542602	RAB5B	P61020	215 aa		11.91	□□□□□ -0.5
PSMD9-208	ENST00000542602	C10orf25	Q5T742	122 aa		11.91	□□□□□ -0.5
PSMD9-208	ENST00000542602	TRBV30	A0A0K0K1B3	111 aa		11.9	□□□□□ -0.5
PSMD9-208	ENST00000542602	C6orf226	Q5I0X4	101 aa		11.9	□□□□□ -0.5
PSMD9-208	ENST00000542602	PACRG	Q96M98	296 aa	Predicted RBP	11.9	□□□□□ -0.5
PSMD9-208	ENST00000542602	CST9L	Q9H4G1	147 aa		11.9	□□□□□ -0.5
PSMD9-208	ENST00000542602	C6orf48	Q9UBA6	75 aa		11.9	□□□□□ -0.5
PSMD9-208	ENST00000542602	CKS1B	P61024	79 aa		11.89	□□□□□ -0.51
PSMD9-208	ENST00000542602	C18orf32	Q8TCD1	76 aa		11.89	□□□□□ -0.51
PSMD9-208	ENST00000542602	CDKN2A-AS1	Q9UH64	79 aa		11.89	□□□□□ -0.51
PSMD9-208	ENST00000542602	TINCR	A0A1B0GVN0	87 aa		11.88	□□□□□ -0.51
PSMD9-208	ENST00000542602	PMVK	Q15126	192 aa		11.88	□□□□□ -0.51
PSMD9-208	ENST00000542602		Q8IZM0	81 aa		11.88	□□□□□ -0.51
PSMD9-208	ENST00000542602		A0A1W2PNN7	141 aa		11.87	□□□□□ -0.51
PSMD9-208	ENST00000542602	HNRNPA3	P51991	378 aa	Known RBP	11.87	□□□□□ -0.51
PSMD9-208	ENST00000542602	C9orf116	Q5BN46	136 aa	Predicted RBP	11.87	□□□□□ -0.51
PSMD9-208	ENST00000542602	TOMM7	Q9P0U1	55 aa		11.87	□□□□□ -0.51
PSMD9-208	ENST00000542602	C2orf82	Q6UX34	121 aa		11.86	□□□□□ -0.51
PSMD9-208	ENST00000542602		Q6ZRP5	223 aa		11.86	□□□□□ -0.51

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