RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 CHTOPQ9Y3Y2 248 aaKnown RBP15.35■□□□□ 0.05
HOMER3-205ENST00000542541 TINCRA0A1B0GVN0 87 aa15.34■□□□□ 0.05
HOMER3-205ENST00000542541 HIST1H2BLQ99880 126 aa15.34■□□□□ 0.05
HOMER3-205ENST00000542541 IGHV3OR16-9A0A0B4J2B5 98 aa15.33■□□□□ 0.04
HOMER3-205ENST00000542541 COX7A2LO14548 114 aa15.32■□□□□ 0.04
HOMER3-205ENST00000542541 MAPKAPK5-AS1Q8N8E1 139 aa15.32■□□□□ 0.04
HOMER3-205ENST00000542541 SYS1-DBNDD2H3BUS1 97 aa15.32■□□□□ 0.04
HOMER3-205ENST00000542541 COX6A2Q02221 97 aa15.32■□□□□ 0.04
HOMER3-205ENST00000542541 SPATA12Q7Z6I5 190 aa15.32■□□□□ 0.04
HOMER3-205ENST00000542541 F8VRH5 84 aa15.31■□□□□ 0.04
HOMER3-205ENST00000542541 IGLC3P0DOY3 106 aa15.31■□□□□ 0.04
HOMER3-205ENST00000542541 LINC00336Q6ZUF6 198 aa15.31■□□□□ 0.04
HOMER3-205ENST00000542541 FRAS1Q86XX4 4008 aa15.31■□□□□ 0.04
HOMER3-205ENST00000542541 DNAH10Q8IVF4 4471 aa15.3■□□□□ 0.04
HOMER3-205ENST00000542541 MALP21145 153 aa15.3■□□□□ 0.04
HOMER3-205ENST00000542541 CFAP161Q6P656 301 aa15.3■□□□□ 0.04
HOMER3-205ENST00000542541 PET117Q6UWS5 81 aa15.3■□□□□ 0.04
HOMER3-205ENST00000542541 C5orf38Q86SI9 138 aa15.3■□□□□ 0.04
HOMER3-205ENST00000542541 C3orf79P0CE67 100 aa15.29■□□□□ 0.04
HOMER3-205ENST00000542541 KRTDAPP60985 99 aa15.29■□□□□ 0.04
HOMER3-205ENST00000542541 ODF1Q14990 250 aa15.29■□□□□ 0.04
HOMER3-205ENST00000542541 CHAC1Q9BUX1 264 aa15.29■□□□□ 0.04
HOMER3-205ENST00000542541 MRPL35Q9NZE8 188 aaKnown RBP15.29■□□□□ 0.04
HOMER3-205ENST00000542541 IGLV4-69A0A075B6H9 119 aa15.28■□□□□ 0.04
HOMER3-205ENST00000542541 LINC00469Q8N7U9 141 aa15.28■□□□□ 0.04
HOMER3-205ENST00000542541 A0A087WZ39 114 aa15.28■□□□□ 0.04
HOMER3-205ENST00000542541 APOMO95445 188 aa15.27■□□□□ 0.03
HOMER3-205ENST00000542541 CDKN2A-AS1Q9UH64 79 aa15.27■□□□□ 0.03
HOMER3-205ENST00000542541 IGLV5-45A0A087WSX0 123 aa15.26■□□□□ 0.03
HOMER3-205ENST00000542541 LRCOL1A6NCL2 159 aa15.26■□□□□ 0.03
HOMER3-205ENST00000542541 USP17L23D6RBM5 183 aa15.26■□□□□ 0.03
HOMER3-205ENST00000542541 EREGO14944 169 aa15.26■□□□□ 0.03
HOMER3-205ENST00000542541 LINC01561Q8N1V8 128 aa15.26■□□□□ 0.03
HOMER3-205ENST00000542541 A0A087WTM6 91 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 IGHV1-58A0A0C4DH39 117 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 H3BRM9 83 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 PLNP26678 52 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 TNP2Q05952 138 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 C14orf177Q52M58 125 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 C11orf86A6NJI1 115 aa15.25■□□□□ 0.03
HOMER3-205ENST00000542541 C20orf202A1L168 122 aa15.24■□□□□ 0.03
HOMER3-205ENST00000542541 LECT2O14960 151 aa15.24■□□□□ 0.03
HOMER3-205ENST00000542541 LINC01545Q5VT33 79 aa15.24■□□□□ 0.03
HOMER3-205ENST00000542541 DPM2O94777 84 aa15.23■□□□□ 0.03
HOMER3-205ENST00000542541 TMEM170BQ5T4T1 132 aa15.22■□□□□ 0.03
HOMER3-205ENST00000542541 ZNF22P17026 224 aaPredicted RBP15.21■□□□□ 0.03
HOMER3-205ENST00000542541 PMCHL2Q9BQD1 86 aa15.21■□□□□ 0.03
HOMER3-205ENST00000542541 DNAH17Q9UFH2 4485 aa15.21■□□□□ 0.03
HOMER3-205ENST00000542541 IGKCP01834 107 aa15.21■□□□□ 0.02
HOMER3-205ENST00000542541 WFDC2Q14508 124 aa15.21■□□□□ 0.02
HOMER3-205ENST00000542541 C15orf56Q8N910 161 aa15.21■□□□□ 0.02
HOMER3-205ENST00000542541 FAT2Q9NYQ8 4349 aa15.2■□□□□ 0.02
HOMER3-205ENST00000542541 IGHV3-64A0A075B6Q5 118 aa15.2■□□□□ 0.02
HOMER3-205ENST00000542541 AKR1D1P51857 326 aa15.2■□□□□ 0.02
HOMER3-205ENST00000542541 OR10D4PQ8NGN7 298 aa15.2■□□□□ 0.02
HOMER3-205ENST00000542541 GVQW2A0A096LPI5 108 aaPredicted RBP15.18■□□□□ 0.02
HOMER3-205ENST00000542541 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
HOMER3-205ENST00000542541 ZNF561-AS1K7EIQ3 104 aa15.18■□□□□ 0.02
HOMER3-205ENST00000542541 Q8N814 137 aa15.18■□□□□ 0.02
HOMER3-205ENST00000542541 ORAOV1Q8WV07 137 aa15.18■□□□□ 0.02
HOMER3-205ENST00000542541 SMIM1B2RUZ4 78 aa15.16■□□□□ 0.02
HOMER3-205ENST00000542541 SPINK8P0C7L1 97 aa15.16■□□□□ 0.02
HOMER3-205ENST00000542541 HIGD2BQ4VC39 106 aa15.16■□□□□ 0.02
HOMER3-205ENST00000542541 SPAG11BQ08648 103 aa15.14■□□□□ 0.01
HOMER3-205ENST00000542541 TMEM223A0PJW6 202 aa15.14■□□□□ 0.01
HOMER3-205ENST00000542541 PRSS2P07478 247 aa15.14■□□□□ 0.01
HOMER3-205ENST00000542541 HERVK_113P61574 105 aa15.12■□□□□ 0.01
HOMER3-205ENST00000542541 TOMM7Q9P0U1 55 aa15.12■□□□□ 0.01
HOMER3-205ENST00000542541 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.11■□□□□ 0.01
HOMER3-205ENST00000542541 IGLV5-39A0A0G2JS06 123 aa15.11■□□□□ 0.01
HOMER3-205ENST00000542541 C6orf226Q5I0X4 101 aa15.11■□□□□ 0.01
HOMER3-205ENST00000542541 Q8IZM0 81 aa15.11■□□□□ 0.01
HOMER3-205ENST00000542541 NTN5Q8WTR8 489 aaPredicted RBP15.11■□□□□ 0.01
HOMER3-205ENST00000542541 C2orf48Q96LS8 159 aa15.11■□□□□ 0.01
HOMER3-205ENST00000542541 F8WDY8 70 aa15.1■□□□□ 0.01
HOMER3-205ENST00000542541 SCGB1D1O95968 90 aa15.1■□□□□ 0.01
HOMER3-205ENST00000542541 COX7B2Q8TF08 81 aa15.1■□□□□ 0.01
HOMER3-205ENST00000542541 PGPEP1Q9NXJ5 209 aa15.1■□□□□ 0.01
HOMER3-205ENST00000542541 KIAA0087Q14695 138 aa15.09■□□□□ 0.01
HOMER3-205ENST00000542541 LINC00526Q96FQ7 95 aa15.09■□□□□ 0.01
HOMER3-205ENST00000542541 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.08■□□□□ 0
HOMER3-205ENST00000542541 CNBPP62633 177 aaKnown RBP15.08■□□□□ 0
HOMER3-205ENST00000542541 CAMK2N2Q96S95 79 aa15.08■□□□□ 0
HOMER3-205ENST00000542541 CKS1BP61024 79 aa15.07■□□□□ 0
HOMER3-205ENST00000542541 PKD1P98161 4303 aa15.06■□□□□ 0
HOMER3-205ENST00000542541 NDUFA1O15239 70 aa15.06■□□□□ 0
HOMER3-205ENST00000542541 CXCL5P42830 114 aa15.06■□□□□ 0
HOMER3-205ENST00000542541 SYCNQ0VAF6 134 aa15.06■□□□□ 0
HOMER3-205ENST00000542541 CDPF1Q6NVV7 123 aa15.06■□□□□ 0
HOMER3-205ENST00000542541 A0A1B0GVY2 172 aa15.05■□□□□ -0
HOMER3-205ENST00000542541 ATOH7Q8N100 152 aa15.05■□□□□ -0
HOMER3-205ENST00000542541 DNAH11Q96DT5 4516 aa15.04■□□□□ -0
HOMER3-205ENST00000542541 IGLV5-52A0A0A0MRZ9 124 aa15.04■□□□□ -0
HOMER3-205ENST00000542541 SLPIP03973 132 aa15.04■□□□□ -0
HOMER3-205ENST00000542541 PLEKHB2Q96CS7 222 aa15.04■□□□□ -0
HOMER3-205ENST00000542541 KRTAP10-2P60368 255 aa15.03■□□□□ -0
HOMER3-205ENST00000542541 JOSD1Q15040 202 aaPredicted RBP15.03■□□□□ -0
HOMER3-205ENST00000542541 STPG4Q8N801 248 aa15.03■□□□□ -0
HOMER3-205ENST00000542541 LEPROTO15243 131 aa15.03■□□□□ -0
HOMER3-205ENST00000542541 CARD19Q96LW7 228 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms