RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 H3BT86 120 aa11□□□□□ -0.65
CNOT9-208ENST00000542068 ODF3L2Q3SX64 289 aa11□□□□□ -0.65
CNOT9-208ENST00000542068 SMIM20Q8N5G0 67 aa10.99□□□□□ -0.65
CNOT9-208ENST00000542068 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
CNOT9-208ENST00000542068 NDUFA1O15239 70 aa10.98□□□□□ -0.65
CNOT9-208ENST00000542068 C11orf72Q8NBR9 251 aa10.98□□□□□ -0.65
CNOT9-208ENST00000542068 SMR3AQ99954 134 aa10.98□□□□□ -0.65
CNOT9-208ENST00000542068 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
CNOT9-208ENST00000542068 AKAP9Q99996 3911 aa10.97□□□□□ -0.65
CNOT9-208ENST00000542068 M0QXV9 152 aa10.97□□□□□ -0.65
CNOT9-208ENST00000542068 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 FAM236AA0A1B0GUQ0 79 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 FAM236BA0A1B0GV22 79 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 BAALC-AS2P0C853 105 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 DEFB130BP0DP73 79 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 DEFB130AP0DP74 79 aa10.96□□□□□ -0.66
CNOT9-208ENST00000542068 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.66
CNOT9-208ENST00000542068 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.66
CNOT9-208ENST00000542068 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.66
CNOT9-208ENST00000542068 SMIM1B2RUZ4 78 aa10.95□□□□□ -0.66
CNOT9-208ENST00000542068 HERVK_113P63121 156 aa10.95□□□□□ -0.66
CNOT9-208ENST00000542068 UBE2L6O14933 153 aa10.95□□□□□ -0.66
CNOT9-208ENST00000542068 RPL36AP83881 106 aaKnown RBP10.95□□□□□ -0.66
CNOT9-208ENST00000542068 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
CNOT9-208ENST00000542068 RPL36ALQ969Q0 106 aaKnown RBP10.95□□□□□ -0.66
CNOT9-208ENST00000542068 FSHBP01225 129 aa10.94□□□□□ -0.66
CNOT9-208ENST00000542068 GAGE2AQ6NT46 116 aa10.94□□□□□ -0.66
CNOT9-208ENST00000542068 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
CNOT9-208ENST00000542068 TIRAPP58753 221 aa10.93□□□□□ -0.66
CNOT9-208ENST00000542068 C1orf158Q8N1D5 194 aa10.93□□□□□ -0.66
CNOT9-208ENST00000542068 A0A096LPF7 62 aa10.93□□□□□ -0.66
CNOT9-208ENST00000542068 TRGV4A0A0C4DH28 118 aa10.93□□□□□ -0.66
CNOT9-208ENST00000542068 COX7A2LO14548 114 aa10.93□□□□□ -0.66
CNOT9-208ENST00000542068 PFN2P35080 140 aa10.92□□□□□ -0.66
CNOT9-208ENST00000542068 LINC00158P58513 81 aa10.92□□□□□ -0.66
CNOT9-208ENST00000542068 LINC01006Q8NI28 216 aa10.91□□□□□ -0.66
CNOT9-208ENST00000542068 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
CNOT9-208ENST00000542068 DNAJC30Q96LL9 226 aa10.91□□□□□ -0.66
CNOT9-208ENST00000542068 ATP5G1P05496 136 aa10.91□□□□□ -0.66
CNOT9-208ENST00000542068 MIR7-3HGQ8N6C7 128 aa10.91□□□□□ -0.66
CNOT9-208ENST00000542068 TIMM17BO60830 172 aa10.9□□□□□ -0.66
CNOT9-208ENST00000542068 PF4P02776 101 aa10.9□□□□□ -0.66
CNOT9-208ENST00000542068 K7EQD1 137 aa10.9□□□□□ -0.67
CNOT9-208ENST00000542068 OR13C6PQ8NH95 151 aa10.9□□□□□ -0.67
CNOT9-208ENST00000542068 VWFP04275 2813 aa10.89□□□□□ -0.67
CNOT9-208ENST00000542068 C5orf38Q86SI9 138 aa10.89□□□□□ -0.67
CNOT9-208ENST00000542068 RNF152Q8N8N0 203 aa10.89□□□□□ -0.67
CNOT9-208ENST00000542068 EDA2RQ9HAV5 297 aa10.89□□□□□ -0.67
CNOT9-208ENST00000542068 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
CNOT9-208ENST00000542068 TEP1Q99973 2627 aaKnown RBP10.88□□□□□ -0.67
CNOT9-208ENST00000542068 DEFB4AO15263 64 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 BEAN1Q3B7T3 259 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 Q6Q795 121 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 KRTAP1-3Q8IUG1 177 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 CDC42SE2Q9NRR3 84 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 CRPP02741 224 aa10.88□□□□□ -0.67
CNOT9-208ENST00000542068 HERV-K104P63124 156 aa10.87□□□□□ -0.67
CNOT9-208ENST00000542068 CLPSL2Q6UWE3 100 aa10.87□□□□□ -0.67
CNOT9-208ENST00000542068 TMEM243Q9BU79 118 aa10.87□□□□□ -0.67
CNOT9-208ENST00000542068 SLPIP03973 132 aa10.86□□□□□ -0.67
CNOT9-208ENST00000542068 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
CNOT9-208ENST00000542068 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 DNAL4O96015 105 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 PAX4O43316 350 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 C9orf129Q5T035 196 aaKnown RBP10.85□□□□□ -0.67
CNOT9-208ENST00000542068 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 C14orf132Q9NPU4 83 aa10.85□□□□□ -0.67
CNOT9-208ENST00000542068 A0A087WYN8 130 aa10.84□□□□□ -0.67
CNOT9-208ENST00000542068 F5H768 121 aa10.84□□□□□ -0.67
CNOT9-208ENST00000542068 IGLV4-60A0A075B6I1 120 aa10.83□□□□□ -0.67
CNOT9-208ENST00000542068 IGKV3D-7A0A0C4DH55 119 aa10.83□□□□□ -0.67
CNOT9-208ENST00000542068 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
CNOT9-208ENST00000542068 COX7B2Q8TF08 81 aa10.83□□□□□ -0.68
CNOT9-208ENST00000542068 SDIM1Q6ZPB5 146 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 SVIPQ8NHG7 77 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 DEFB121Q5J5C9 76 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
CNOT9-208ENST00000542068 A8MTW9 85 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 SMIM11BQ8TCY0 68 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 COPS9Q8WXC6 57 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 LINC01600Q96MT4 127 aa10.82□□□□□ -0.68
CNOT9-208ENST00000542068 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
CNOT9-208ENST00000542068 HTN3P15516 51 aa10.81□□□□□ -0.68
CNOT9-208ENST00000542068 MALP21145 153 aa10.81□□□□□ -0.68
CNOT9-208ENST00000542068 LINC00482Q8N8I6 264 aa10.81□□□□□ -0.68
CNOT9-208ENST00000542068 LECT2O14960 151 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 MRPL23Q16540 153 aaKnown RBP10.8□□□□□ -0.68
CNOT9-208ENST00000542068 TRBV7-7A0A0K0K1E9 115 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 XCL1P47992 114 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 C22orf24Q9Y442 160 aa10.8□□□□□ -0.68
CNOT9-208ENST00000542068 OTOGQ6ZRI0 2925 aa10.79□□□□□ -0.68
CNOT9-208ENST00000542068 NCR3O14931 201 aa10.79□□□□□ -0.68
CNOT9-208ENST00000542068 TRACP01848 142 aa10.79□□□□□ -0.68
CNOT9-208ENST00000542068 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
CNOT9-208ENST00000542068 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms