RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CD24P25063 80 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 ELOF1P60002 83 aaKnown RBP1.96□□□□□ -2.1
USP28-210ENST00000542033 PRCDQ00LT1 54 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 Q5VV11 94 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 LYZL1Q6UWQ5 148 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 MUSTN1Q8IVN3 82 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 CIRBP-AS1Q8TBR5 109 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 KLF14Q8TD94 323 aaPredicted RBP1.96□□□□□ -2.1
USP28-210ENST00000542033 LINC00467Q9BRT7 94 aa1.96□□□□□ -2.1
USP28-210ENST00000542033 ZNF706Q9Y5V0 76 aaPredicted RBP1.96□□□□□ -2.1
USP28-210ENST00000542033 IGLV3-12A0A075B6K2 115 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 IGHV1-3A0A0C4DH29 117 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 C5orf67F2Z3F1 127 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 H0YGX0 51 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 PSCAO43653 123 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 NDUFB1O75438 58 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 CLPSP04118 112 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 SAA2P0DJI9 122 aaPredicted RBP1.95□□□□□ -2.1
USP28-210ENST00000542033 FXYD7P58549 80 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 LINC00315P59091 139 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 SPINK9Q5DT21 86 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 Q86TA4 180 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 AMELXQ99217 191 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 DYSFO75923 2080 aa1.95□□□□□ -2.1
USP28-210ENST00000542033 MYOFQ9NZM1 2061 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 H3BQ85 93 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 CHKB-CPT1BH3BT56 60 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 H7C2G1 150 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 M0R1W7 72 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 PDE6GP18545 87 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 MIAQ16674 131 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 FAM74A4Q5TZK3 123 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 CASC2Q6XLA1 102 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 LINC00322Q6ZN03 302 aaPredicted RBP1.94□□□□□ -2.1
USP28-210ENST00000542033 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
USP28-210ENST00000542033 SPTSSBQ8NFR3 76 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 LINC00574Q9H8X3 128 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 MRPL36Q9P0J6 103 aaKnown RBP1.94□□□□□ -2.1
USP28-210ENST00000542033 C22orf24Q9Y442 160 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 SNURFQ9Y675 71 aa1.94□□□□□ -2.1
USP28-210ENST00000542033 HEATR1Q9H583 2144 aaKnown RBP1.94□□□□□ -2.1
USP28-210ENST00000542033 ARID1AO14497 2285 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 TET1Q8NFU7 2136 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 IGLV4-60A0A075B6I1 120 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 IGKV3D-11A0A0A0MRZ8 115 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 LCE6AA0A183 80 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 MRPL33O75394 65 aaKnown RBP1.93□□□□□ -2.1
USP28-210ENST00000542033 IGHV1-69P01742 117 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 BSPH1Q075Z2 132 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 NREPQ16612 68 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 LUZP6Q538Z0 58 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 ENHOQ6UWT2 76 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 C1orf64Q8NEQ6 169 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 RNF5Q99942 180 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 Q9BRP9 147 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 SND1-IT1Q9HBX3 110 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 SHANK1Q9Y566 2161 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 MYO7AQ13402 2215 aa1.93□□□□□ -2.1
USP28-210ENST00000542033 MUC22E2RYF6 1773 aaPredicted RBP1.93□□□□□ -2.1
USP28-210ENST00000542033 IGKV1OR2-108A0A075B7D4 117 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 A6NED7 52 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 CMC4P56277 68 aaPredicted RBP1.92□□□□□ -2.1
USP28-210ENST00000542033 MOBPQ13875 183 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 DEFB114Q30KQ6 69 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 SPANXA2-OT1Q8N9U9 137 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 NDUFA4L2Q9NRX3 87 aa1.92□□□□□ -2.1
USP28-210ENST00000542033 DEFB108AA8MXU0 73 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 LY6HO94772 140 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 LHBP01229 141 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 IGLV1-51P01701 117 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 CTSGP08311 255 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 CRIP1P50238 77 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 DEFB110Q30KQ9 67 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 Q8N814 137 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 TMEM167AQ8TBQ9 72 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 C14orf132Q9NPU4 83 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 ORMDL1Q9P0S3 153 aa1.91□□□□□ -2.1
USP28-210ENST00000542033 PCNX2A6NKB5 2137 aa1.9□□□□□ -2.1
USP28-210ENST00000542033 LOC110117498A0A087WWA1 95 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 IGHV3-43A0A0B4J1X8 118 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 TRAV10A0A0B4J240 114 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 C10orf142B7Z368 130 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 IGLV3-19P01714 112 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 CCL5P13501 91 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 TSPEAR-AS2P59090 65 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 LINC00483Q53H64 154 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 B9D2Q9BPU9 175 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 CCL26Q9Y258 94 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 S4R3C0 116 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 ESPL1Q14674 2120 aa1.9□□□□□ -2.11
USP28-210ENST00000542033 CABIN1Q9Y6J0 2220 aa1.89□□□□□ -2.11
USP28-210ENST00000542033 IGKV1D-37A0A075B6S9 117 aa1.89□□□□□ -2.11
USP28-210ENST00000542033 IGHV3-15A0A0B4J1V0 119 aa1.89□□□□□ -2.11
USP28-210ENST00000542033 TRAV12-3A0A0B4J271 114 aa1.89□□□□□ -2.11
USP28-210ENST00000542033 TRBV6-5A0A0K0K1A5 114 aa1.89□□□□□ -2.11
USP28-210ENST00000542033 IGHV1-46P01743 117 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms