RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 BAGE3Q86Y29 109 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 ZNF563Q8TA94 476 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 KCPQ6ZWJ8 1503 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 ABCA8O94911 1581 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 CFAP74Q9C0B2 1584 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 DIP2CQ9Y2E4 1556 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 IQGAP3Q86VI3 1631 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 ICE1Q9Y2F5 2266 aa1.54□□□□□ -2.16
LEMD3-204ENST00000542032 D6R8Y8 96 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 J3QRE1 110 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 UQCR11O14957 56 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 SPINT3P49223 89 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 CAV3P56539 151 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 ARHGEF5Q12774 1597 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 PLGLAQ15195 96 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 MUSTN1Q8IVN3 82 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 MYO5CQ9NQX4 1742 aa1.53□□□□□ -2.16
LEMD3-204ENST00000542032 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
LEMD3-204ENST00000542032 MYO7BQ6PIF6 2116 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 RGPD8O14715 1765 aaPredicted RBP1.52□□□□□ -2.17
LEMD3-204ENST00000542032 RGPD5Q99666 1765 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 PHRF1Q9P1Y6 1649 aaKnown RBP1.52□□□□□ -2.17
LEMD3-204ENST00000542032 MAGI3Q5TCQ9 1506 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 ABCC2Q92887 1545 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 DUOX2Q9NRD8 1548 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 TRGV1A0A0A0MS02 117 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 CEBPZOSA8MTT3 80 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 UMAD1C9J7I0 102 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 KRTAP13-4Q3LI77 160 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 DEFB121Q5J5C9 76 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 Q6ZQY7 126 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 OBSCN-AS1Q96MR7 158 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 Q96NJ1 140 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 CCL19Q99731 98 aa1.52□□□□□ -2.17
LEMD3-204ENST00000542032 MGPP08493 103 aa1.51□□□□□ -2.17
LEMD3-204ENST00000542032 FDCSPQ8NFU4 85 aa1.51□□□□□ -2.17
LEMD3-204ENST00000542032 RGPD2P0DJD1 1756 aa1.51□□□□□ -2.17
LEMD3-204ENST00000542032 MROH1Q8NDA8 1641 aa1.51□□□□□ -2.17
LEMD3-204ENST00000542032 VWDEQ8N2E2 1590 aa1.51□□□□□ -2.17
LEMD3-204ENST00000542032 PRRC2BQ5JSZ5 2229 aaKnown RBP1.5□□□□□ -2.17
LEMD3-204ENST00000542032 KNDC1Q76NI1 1749 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 TRAV1-2A0A0B4J238 106 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 ZNF137PP52743 207 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 UNQ6190/PRO20217Q6UXQ8 127 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 C6orf201Q7Z4U5 140 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 SMIM4Q8WVI0 70 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 PROK2Q9HC23 129 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 SCN7AQ01118 1682 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 ZNF236Q9UL36 1845 aa1.5□□□□□ -2.17
LEMD3-204ENST00000542032 SIPA1L3O60292 1781 aaPredicted RBP1.49□□□□□ -2.17
LEMD3-204ENST00000542032 A0A087WVE0 104 aa1.49□□□□□ -2.17
LEMD3-204ENST00000542032 ACYP2P14621 99 aa1.49□□□□□ -2.17
LEMD3-204ENST00000542032 ZCCHC13Q8WW36 166 aaKnown RBP1.49□□□□□ -2.17
LEMD3-204ENST00000542032 KDM3BQ7LBC6 1761 aa1.49□□□□□ -2.17
LEMD3-204ENST00000542032 LRRC9Q6ZRR7 1453 aa1.49□□□□□ -2.17
LEMD3-204ENST00000542032 MADDQ8WXG6 1647 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 MROH2BQ7Z745 1585 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 INO80Q9ULG1 1556 aaPredicted RBP1.48□□□□□ -2.17
LEMD3-204ENST00000542032 A0A087WWC5 75 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 DEFB103AP81534 67 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 COX17Q14061 63 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 Q6JHZ5 121 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 LINC00846Q9NV44 126 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 HFM1A2PYH4 1435 aa1.48□□□□□ -2.17
LEMD3-204ENST00000542032 ARFGEF2Q9Y6D5 1785 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 ZMYM4Q5VZL5 1548 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 DEFB107AQ8IZN7 70 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 WIZO95785 1651 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 TMEM131LA2VDJ0 1609 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 SDK1Q7Z5N4 2213 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 SETBP1Q9Y6X0 1596 aa1.47□□□□□ -2.17
LEMD3-204ENST00000542032 IFT172Q9UG01 1749 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 CUX1P39880 1505 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 MED13LQ71F56 2210 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 A0A087WXM4 84 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 TRBV30A0A0K0K1B3 111 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 GCHFRP30047 84 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 C10orf99Q6UWK7 81 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 UBE2D4Q9Y2X8 147 aa1.46□□□□□ -2.18
LEMD3-204ENST00000542032 THOC2Q8NI27 1593 aaKnown RBP1.46□□□□□ -2.18
LEMD3-204ENST00000542032 NCOA6Q14686 2063 aaPredicted RBP1.46□□□□□ -2.18
LEMD3-204ENST00000542032 EFCAB5A4FU69 1503 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 NCR3O14931 201 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 IFI27P40305 119 aaPredicted RBP1.45□□□□□ -2.18
LEMD3-204ENST00000542032 GNGT1P63211 74 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 PCOTHQ58A44 107 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 LINC00472Q9H8W2 130 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 E9PCH4 1651 aa1.45□□□□□ -2.18
LEMD3-204ENST00000542032 ANKRD36A6QL64 1941 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 H0Y9P7 68 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 COX8AP10176 69 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 ATP5EP2Q5VTU8 51 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 SPATA8Q6RVD6 105 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 TMEM263Q8WUH6 116 aaKnown RBP1.44□□□□□ -2.18
LEMD3-204ENST00000542032 PLAC8Q9NZF1 115 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 HILPDAQ9Y5L2 63 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 DNAJC13O75165 2243 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 RAPGEF6Q8TEU7 1601 aa1.44□□□□□ -2.18
LEMD3-204ENST00000542032 RGPD1P0DJD0 1748 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms