RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 REG3GQ6UW15 175 aa7.11□□□□□ -1.27
VTN-203ENST00000542029 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
VTN-203ENST00000542029 LINC01600Q96MT4 127 aa7.11□□□□□ -1.27
VTN-203ENST00000542029 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
VTN-203ENST00000542029 IMMP2LQ96T52 175 aa7.1□□□□□ -1.27
VTN-203ENST00000542029 IGHV3OR16-9A0A0B4J2B5 98 aa7.09□□□□□ -1.27
VTN-203ENST00000542029 NPYP01303 97 aa7.09□□□□□ -1.27
VTN-203ENST00000542029 IFI27P40305 119 aaPredicted RBP7.09□□□□□ -1.27
VTN-203ENST00000542029 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
VTN-203ENST00000542029 MRPL35Q9NZE8 188 aaKnown RBP7.09□□□□□ -1.27
VTN-203ENST00000542029 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
VTN-203ENST00000542029 IFITM10A6NMD0 228 aa7.08□□□□□ -1.28
VTN-203ENST00000542029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.08□□□□□ -1.28
VTN-203ENST00000542029 NDUFA1O15239 70 aa7.08□□□□□ -1.28
VTN-203ENST00000542029 RPL18AQ02543 176 aaKnown RBP7.08□□□□□ -1.28
VTN-203ENST00000542029 PNRC1Q12796 327 aaPredicted RBP7.08□□□□□ -1.28
VTN-203ENST00000542029 ORAOV1Q8WV07 137 aa7.08□□□□□ -1.28
VTN-203ENST00000542029 PRELID3AQ96N28 172 aa7.08□□□□□ -1.28
VTN-203ENST00000542029 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
VTN-203ENST00000542029 TGIF2-C20orf24A0A0A6YYL0 155 aa7.07□□□□□ -1.28
VTN-203ENST00000542029 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
VTN-203ENST00000542029 SRSF9Q13242 221 aaKnown RBP eCLIP7.07□□□□□ -1.28
VTN-203ENST00000542029 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
VTN-203ENST00000542029 A0A1W2PNN7 141 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 MT-ND4LP03901 98 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 RAB14P61106 215 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 ANAPC16Q96DE5 110 aa7.06□□□□□ -1.28
VTN-203ENST00000542029 A0A087WZ39 114 aa7.05□□□□□ -1.28
VTN-203ENST00000542029 MT-ND6P03923 174 aa7.05□□□□□ -1.28
VTN-203ENST00000542029 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
VTN-203ENST00000542029 TMEM141Q96I45 108 aa7.05□□□□□ -1.28
VTN-203ENST00000542029 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
VTN-203ENST00000542029 MAP1LC3AQ9H492 121 aa7.05□□□□□ -1.28
VTN-203ENST00000542029 K7EMI3 77 aa7.04□□□□□ -1.28
VTN-203ENST00000542029 Q6ZN92 141 aa7.04□□□□□ -1.28
VTN-203ENST00000542029 LINC01561Q8N1V8 128 aa7.04□□□□□ -1.28
VTN-203ENST00000542029 C2orf88Q9BSF0 95 aa7.04□□□□□ -1.28
VTN-203ENST00000542029 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 NPSP0C0P6 89 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 G0S2P27469 103 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 LINC00242Q5T6M2 205 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 TEX43Q6ZNM6 134 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 PSORS1C2Q9UIG4 136 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 CYSLTR1Q9Y271 337 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 TNXBP22105 4242 aa7.03□□□□□ -1.28
VTN-203ENST00000542029 TRBV30A0A0K0K1B3 111 aa7.02□□□□□ -1.29
VTN-203ENST00000542029 Q8N8P6 123 aa7.02□□□□□ -1.29
VTN-203ENST00000542029 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
VTN-203ENST00000542029 LOC389332A0A1B0GUA5 103 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 C1orf137Q5JT78 98 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 PAPPA-AS1Q5QFB9 102 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 UNQ6190/PRO20217Q6UXQ8 127 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 VCX2Q9H322 139 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 NXT2Q9NPJ8 142 aaKnown RBP7.01□□□□□ -1.29
VTN-203ENST00000542029 C6orf48Q9UBA6 75 aa7.01□□□□□ -1.29
VTN-203ENST00000542029 UBE2D1P51668 147 aa7□□□□□ -1.29
VTN-203ENST00000542029 SEC11AP67812 179 aa7□□□□□ -1.29
VTN-203ENST00000542029 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
VTN-203ENST00000542029 DIRC1Q969H9 104 aa7□□□□□ -1.29
VTN-203ENST00000542029 CTDSP1Q9GZU7 261 aa7□□□□□ -1.29
VTN-203ENST00000542029 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
VTN-203ENST00000542029 AMELXQ99217 191 aa6.99□□□□□ -1.29
VTN-203ENST00000542029 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
VTN-203ENST00000542029 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
VTN-203ENST00000542029 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
VTN-203ENST00000542029 IGLV7-43P04211 117 aa6.98□□□□□ -1.29
VTN-203ENST00000542029 PRSS2P07478 247 aa6.98□□□□□ -1.29
VTN-203ENST00000542029 IGIPA6NJ69 53 aa6.97□□□□□ -1.29
VTN-203ENST00000542029 CKS1BP61024 79 aa6.97□□□□□ -1.29
VTN-203ENST00000542029 HERVK_113P63121 156 aa6.97□□□□□ -1.29
VTN-203ENST00000542029 FAM19A3Q7Z5A8 133 aa6.97□□□□□ -1.29
VTN-203ENST00000542029 TRAV9-1A0A075B6T8 112 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 LINC01549A6NIU2 74 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 CLLU1Q5K131 121 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 FAM19A5Q7Z5A7 132 aaPredicted RBP6.96□□□□□ -1.3
VTN-203ENST00000542029 TIMM17AQ99595 171 aa6.96□□□□□ -1.3
VTN-203ENST00000542029 LRP2P98164 4655 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 FAM168BA1KXE4 195 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 M0QXV9 152 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 UBE2BP63146 152 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 ODF1Q14990 250 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 UQCC3Q6UW78 93 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 C2orf82Q6UX34 121 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 Q8IZM0 81 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 GEMIN7Q9H840 131 aaKnown RBP6.95□□□□□ -1.3
VTN-203ENST00000542029 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
VTN-203ENST00000542029 CXCL5P42830 114 aa6.94□□□□□ -1.3
VTN-203ENST00000542029 TOMM6Q96B49 74 aa6.94□□□□□ -1.3
VTN-203ENST00000542029 ALKBH7Q9BT30 221 aaPredicted RBP6.94□□□□□ -1.3
VTN-203ENST00000542029 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
VTN-203ENST00000542029 H0Y9J4 135 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms