RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 HSPB8Q9UJY1 196 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 PKD1P98161 4303 aa13.9□□□□□ -0.18
MSRB3-211ENST00000541897 DYNC1H1Q14204 4646 aaKnown RBP13.89□□□□□ -0.19
MSRB3-211ENST00000541897 TNP2Q05952 138 aa13.89□□□□□ -0.19
MSRB3-211ENST00000541897 LINC00242Q5T6M2 205 aa13.89□□□□□ -0.19
MSRB3-211ENST00000541897 ZC2HC1BQ5TFG8 222 aa13.89□□□□□ -0.19
MSRB3-211ENST00000541897 RYR1P21817 5038 aa13.88□□□□□ -0.19
MSRB3-211ENST00000541897 A0A087WTM6 91 aa13.87□□□□□ -0.19
MSRB3-211ENST00000541897 IGHV3OR16-9A0A0B4J2B5 98 aa13.87□□□□□ -0.19
MSRB3-211ENST00000541897 DNAH11Q96DT5 4516 aa13.87□□□□□ -0.19
MSRB3-211ENST00000541897 TRAV12-1A0A0B4J245 112 aa13.86□□□□□ -0.19
MSRB3-211ENST00000541897 EREGO14944 169 aa13.85□□□□□ -0.19
MSRB3-211ENST00000541897 PRSS1P07477 247 aa13.85□□□□□ -0.19
MSRB3-211ENST00000541897 HERVK_113P63121 156 aa13.85□□□□□ -0.19
MSRB3-211ENST00000541897 TINCRA0A1B0GVN0 87 aa13.84□□□□□ -0.19
MSRB3-211ENST00000541897 COX7A2LO14548 114 aa13.84□□□□□ -0.19
MSRB3-211ENST00000541897 S100A6P06703 90 aa13.84□□□□□ -0.19
MSRB3-211ENST00000541897 C14orf177Q52M58 125 aa13.84□□□□□ -0.19
MSRB3-211ENST00000541897 CFAP161Q6P656 301 aa13.84□□□□□ -0.19
MSRB3-211ENST00000541897 LINC01561Q8N1V8 128 aa13.83□□□□□ -0.2
MSRB3-211ENST00000541897 USP17L23D6RBM5 183 aa13.82□□□□□ -0.2
MSRB3-211ENST00000541897 FABP4P15090 132 aa13.82□□□□□ -0.2
MSRB3-211ENST00000541897 A0A087WZ39 114 aa13.81□□□□□ -0.2
MSRB3-211ENST00000541897 A0A0J9YXV3 536 aa13.81□□□□□ -0.2
MSRB3-211ENST00000541897 IGLC3P0DOY3 106 aa13.81□□□□□ -0.2
MSRB3-211ENST00000541897 COX6A2Q02221 97 aa13.81□□□□□ -0.2
MSRB3-211ENST00000541897 WFDC2Q14508 124 aa13.81□□□□□ -0.2
MSRB3-211ENST00000541897 GEMIN7Q9H840 131 aaKnown RBP13.81□□□□□ -0.2
MSRB3-211ENST00000541897 IGLV5-45A0A087WSX0 123 aa13.8□□□□□ -0.2
MSRB3-211ENST00000541897 IGHV1-58A0A0C4DH39 117 aa13.8□□□□□ -0.2
MSRB3-211ENST00000541897 Q8N814 137 aa13.8□□□□□ -0.2
MSRB3-211ENST00000541897 MAP1LC3CQ9BXW4 147 aa13.8□□□□□ -0.2
MSRB3-211ENST00000541897 APOMO95445 188 aa13.79□□□□□ -0.2
MSRB3-211ENST00000541897 C5orf38Q86SI9 138 aa13.79□□□□□ -0.2
MSRB3-211ENST00000541897 HIST3H2BBQ8N257 126 aa13.79□□□□□ -0.2
MSRB3-211ENST00000541897 C15orf56Q8N910 161 aa13.79□□□□□ -0.2
MSRB3-211ENST00000541897 CHTOPQ9Y3Y2 248 aaKnown RBP13.79□□□□□ -0.2
MSRB3-211ENST00000541897 IGLV4-69A0A075B6H9 119 aa13.78□□□□□ -0.2
MSRB3-211ENST00000541897 F8VRH5 84 aa13.78□□□□□ -0.2
MSRB3-211ENST00000541897 LECT2O14960 151 aa13.78□□□□□ -0.2
MSRB3-211ENST00000541897 MALP21145 153 aa13.78□□□□□ -0.2
MSRB3-211ENST00000541897 SPATA12Q7Z6I5 190 aa13.78□□□□□ -0.2
MSRB3-211ENST00000541897 GVQW2A0A096LPI5 108 aaPredicted RBP13.77□□□□□ -0.21
MSRB3-211ENST00000541897 ODF1Q14990 250 aa13.77□□□□□ -0.21
MSRB3-211ENST00000541897 NTN5Q8WTR8 489 aaPredicted RBP13.77□□□□□ -0.21
MSRB3-211ENST00000541897 C5orf52A6NGY3 159 aa13.76□□□□□ -0.21
MSRB3-211ENST00000541897 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
MSRB3-211ENST00000541897 CHAC1Q9BUX1 264 aa13.76□□□□□ -0.21
MSRB3-211ENST00000541897 CDKN2A-AS1Q9UH64 79 aa13.76□□□□□ -0.21
MSRB3-211ENST00000541897 ABCA13Q86UQ4 5058 aa13.76□□□□□ -0.21
MSRB3-211ENST00000541897 IGHV3-64A0A075B6Q5 118 aa13.75□□□□□ -0.21
MSRB3-211ENST00000541897 S100A2P29034 98 aa13.75□□□□□ -0.21
MSRB3-211ENST00000541897 SNRPEP62304 92 aaKnown RBP13.75□□□□□ -0.21
MSRB3-211ENST00000541897 PGPEP1Q9NXJ5 209 aa13.75□□□□□ -0.21
MSRB3-211ENST00000541897 SYS1-DBNDD2H3BUS1 97 aa13.74□□□□□ -0.21
MSRB3-211ENST00000541897 CDPF1Q6NVV7 123 aa13.74□□□□□ -0.21
MSRB3-211ENST00000541897 LINC00469Q8N7U9 141 aa13.74□□□□□ -0.21
MSRB3-211ENST00000541897 MRPL35Q9NZE8 188 aaKnown RBP13.74□□□□□ -0.21
MSRB3-211ENST00000541897 PET117Q6UWS5 81 aa13.73□□□□□ -0.21
MSRB3-211ENST00000541897 HIST1H2BLQ99880 126 aa13.73□□□□□ -0.21
MSRB3-211ENST00000541897 hDV102S1A0JD36 115 aa13.72□□□□□ -0.21
MSRB3-211ENST00000541897 C11orf86A6NJI1 115 aa13.72□□□□□ -0.21
MSRB3-211ENST00000541897 H3BRM9 83 aa13.72□□□□□ -0.21
MSRB3-211ENST00000541897 H0Y8G0 127 aa13.71□□□□□ -0.21
MSRB3-211ENST00000541897 C3orf79P0CE67 100 aa13.71□□□□□ -0.21
MSRB3-211ENST00000541897 ZNF22P17026 224 aaPredicted RBP13.71□□□□□ -0.21
MSRB3-211ENST00000541897 PLNP26678 52 aa13.71□□□□□ -0.21
MSRB3-211ENST00000541897 CNBPP62633 177 aaKnown RBP13.71□□□□□ -0.21
MSRB3-211ENST00000541897 F8WDY8 70 aa13.7□□□□□ -0.22
MSRB3-211ENST00000541897 ZNF561-AS1K7EIQ3 104 aa13.7□□□□□ -0.22
MSRB3-211ENST00000541897 ORAOV1Q8WV07 137 aa13.7□□□□□ -0.22
MSRB3-211ENST00000541897 KRTAP10-2P60368 255 aa13.69□□□□□ -0.22
MSRB3-211ENST00000541897 HIGD2BQ4VC39 106 aa13.69□□□□□ -0.22
MSRB3-211ENST00000541897 LINC01545Q5VT33 79 aa13.69□□□□□ -0.22
MSRB3-211ENST00000541897 C2orf48Q96LS8 159 aa13.69□□□□□ -0.22
MSRB3-211ENST00000541897 SMIM1B2RUZ4 78 aa13.68□□□□□ -0.22
MSRB3-211ENST00000541897 DPM2O94777 84 aa13.68□□□□□ -0.22
MSRB3-211ENST00000541897 SPAG11BQ08648 103 aa13.68□□□□□ -0.22
MSRB3-211ENST00000541897 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.67□□□□□ -0.22
MSRB3-211ENST00000541897 TMEM170BQ5T4T1 132 aa13.67□□□□□ -0.22
MSRB3-211ENST00000541897 Q8IZM0 81 aa13.67□□□□□ -0.22
MSRB3-211ENST00000541897 KRTAP4-5Q9BYR2 181 aa13.67□□□□□ -0.22
MSRB3-211ENST00000541897 KRTDAPP60985 99 aa13.66□□□□□ -0.22
MSRB3-211ENST00000541897 KIAA0087Q14695 138 aa13.66□□□□□ -0.22
MSRB3-211ENST00000541897 IGLV5-52A0A0A0MRZ9 124 aa13.65□□□□□ -0.22
MSRB3-211ENST00000541897 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.65□□□□□ -0.22
MSRB3-211ENST00000541897 IGLV5-39A0A0G2JS06 123 aa13.65□□□□□ -0.22
MSRB3-211ENST00000541897 IGKCP01834 107 aa13.65□□□□□ -0.22
MSRB3-211ENST00000541897 HSPG2P98160 4391 aa13.64□□□□□ -0.23
MSRB3-211ENST00000541897 SLPIP03973 132 aa13.64□□□□□ -0.23
MSRB3-211ENST00000541897 SPINK8P0C7L1 97 aa13.64□□□□□ -0.23
MSRB3-211ENST00000541897 AKR1D1P51857 326 aa13.64□□□□□ -0.23
MSRB3-211ENST00000541897 TMEM223A0PJW6 202 aa13.63□□□□□ -0.23
MSRB3-211ENST00000541897 C20orf202A1L168 122 aa13.63□□□□□ -0.23
MSRB3-211ENST00000541897 C9orf163Q8N9P6 203 aa13.63□□□□□ -0.23
MSRB3-211ENST00000541897 PRSS2P07478 247 aa13.62□□□□□ -0.23
MSRB3-211ENST00000541897 PMCHL2Q9BQD1 86 aa13.62□□□□□ -0.23
MSRB3-211ENST00000541897 TMA7Q9Y2S6 64 aaKnown RBP13.62□□□□□ -0.23
MSRB3-211ENST00000541897 LRP1BQ9NZR2 4599 aa13.61□□□□□ -0.23
MSRB3-211ENST00000541897 CXCL5P42830 114 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms