RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CFC1P0CG37 223 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 HERVK_113P61574 105 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 MRPL23Q16540 153 aaKnown RBP6.15□□□□□ -1.43
THBS3-210ENST00000541576 TAL2Q16559 108 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 TRBV10-1A0A0K0K1A3 114 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 IFITM1P13164 125 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 TSPEAR-AS2P59090 65 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 FHL2Q14192 279 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 RNASE13Q5GAN3 156 aaKnown RBP6.14□□□□□ -1.43
THBS3-210ENST00000541576 DNHD1Q96M86 4753 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 TRBV6-4A0A1B0GX49 114 aa6.14□□□□□ -1.43
THBS3-210ENST00000541576 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
THBS3-210ENST00000541576 TRAV8-4A0A0B4J246 113 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 SPART-AS1P0CW21 52 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 DAD1P61803 113 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 RPL36AP83881 106 aaKnown RBP6.13□□□□□ -1.43
THBS3-210ENST00000541576 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 LYRM7Q5U5X0 104 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 ZNRF2Q8NHG8 242 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 RPL36ALQ969Q0 106 aaKnown RBP6.13□□□□□ -1.43
THBS3-210ENST00000541576 PRO1854Q9UHT4 67 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 CELA1Q9UNI1 258 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 TSHBP01222 138 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 RHOHQ15669 191 aa6.13□□□□□ -1.43
THBS3-210ENST00000541576 SBSPONQ8IVN8 264 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 A0A0J9YY99 117 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 TMEM262E9PQX1 116 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 IGHV3-38A0A0C4DH36 116 aa6.12□□□□□ -1.43
THBS3-210ENST00000541576 UBE2D1P51668 147 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 UBE2D3P61077 147 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 UBE2D2P62837 147 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 MUSTN1Q8IVN3 82 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 DAND5Q8N907 189 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 ATP6V0E2Q8NHE4 81 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 MRAPQ8TCY5 172 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
THBS3-210ENST00000541576 LOC100131303A0A0U1RQF7 123 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 ATP5G1P05496 136 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 DAZ4Q86SG3 579 aaKnown RBP6.1□□□□□ -1.43
THBS3-210ENST00000541576 C11orf68Q9H3H3 251 aaKnown RBP6.1□□□□□ -1.43
THBS3-210ENST00000541576 PPDPFQ9H3Y8 114 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 DAZ3Q9NR90 486 aaKnown RBP6.1□□□□□ -1.43
THBS3-210ENST00000541576 PRO0255Q9UI72 69 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
THBS3-210ENST00000541576 IGIPA6NJ69 53 aa6.09□□□□□ -1.43
THBS3-210ENST00000541576 J3QQQ9 107 aa6.09□□□□□ -1.43
THBS3-210ENST00000541576 TM2D3Q9BRN9 247 aa6.09□□□□□ -1.43
THBS3-210ENST00000541576 KRTAP21-3Q3LHN1 58 aa6.09□□□□□ -1.43
THBS3-210ENST00000541576 F5H768 121 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 IGHV3-30P01768 117 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 IGHV3-30-5P0DP03 117 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 GYPEP15421 78 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 ZNF625Q96I27 306 aaPredicted RBP6.08□□□□□ -1.44
THBS3-210ENST00000541576 CHCHD7Q9BUK0 85 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 KLK5Q9Y337 293 aaPredicted RBP6.08□□□□□ -1.44
THBS3-210ENST00000541576 A0A0J9YWU9 116 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 PAX4O43316 350 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 HTN3P15516 51 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 LINC01620Q4KN68 170 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 TIMM17AQ99595 171 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 LINC00694P0DN24 101 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 ZNF22P17026 224 aaPredicted RBP6.08□□□□□ -1.44
THBS3-210ENST00000541576 TMEM141Q96I45 108 aa6.08□□□□□ -1.44
THBS3-210ENST00000541576 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 CEMP1Q6PRD7 247 aaPredicted RBP6.07□□□□□ -1.44
THBS3-210ENST00000541576 NTM-AS1Q6ZSK4 140 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 VCX2Q9H322 139 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
THBS3-210ENST00000541576 TRAV12-1A0A0B4J245 112 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
THBS3-210ENST00000541576 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
THBS3-210ENST00000541576 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
THBS3-210ENST00000541576 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 PMVKQ15126 192 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 FAM104AQ969W3 186 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 VSIG2Q96IQ7 327 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 IGLV4-69A0A075B6H9 119 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 M0QXV9 152 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 TRIAP1O43715 76 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 STAB2Q8WWQ8 2551 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 EIF4EBP3O60516 100 aaPredicted RBP6.06□□□□□ -1.44
THBS3-210ENST00000541576 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 PYGO1Q9Y3Y4 419 aa6.06□□□□□ -1.44
THBS3-210ENST00000541576 Q6ZTC4 211 aa6.05□□□□□ -1.44
THBS3-210ENST00000541576 C11orf45Q8TAV5 145 aa6.05□□□□□ -1.44
THBS3-210ENST00000541576 SPANXA1Q9NS26 97 aa6.05□□□□□ -1.44
THBS3-210ENST00000541576 UBE2D4Q9Y2X8 147 aa6.05□□□□□ -1.44
THBS3-210ENST00000541576 NANOS2P60321 138 aaKnown RBP6.04□□□□□ -1.44
THBS3-210ENST00000541576 TMEM243Q9BU79 118 aa6.04□□□□□ -1.44
THBS3-210ENST00000541576 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
THBS3-210ENST00000541576 IGLV4-3A0A075B6K6 122 aa6.04□□□□□ -1.44
THBS3-210ENST00000541576 A0A096LPF7 62 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms