RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
DDB1-219ENST00000541513 ADM2Q7Z4H4 148 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 SIGLECL1Q8N7X8 197 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 CMTM2Q8TAZ6 248 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 UBALD1Q8TB05 177 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 FAM213BQ8TBF2 198 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 SMIM4Q8WVI0 70 aa3.65□□□□□ -1.83
DDB1-219ENST00000541513 CUBNO60494 3623 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 FBN1P35555 2871 aaKnown RBP3.64□□□□□ -1.83
DDB1-219ENST00000541513 A0A0J9YWU9 116 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 NAP1L6A6NFF2 107 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 UMAD1C9J7I0 102 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 K7ERJ3 54 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 CREBL2O60519 120 aaPredicted RBP3.64□□□□□ -1.83
DDB1-219ENST00000541513 IGHV3-7P01780 117 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 FXYD7P58549 80 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 C15orf32Q32M92 178 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 MIC13Q5XKP0 118 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 DYNAPQ8N1N2 210 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 SPANXA2-OT1Q8N9U9 137 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 LEAP2Q969E1 77 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 DIRC1Q969H9 104 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 MGST2Q99735 147 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 EPDR1Q9UM22 224 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 TENM1Q9UKZ4 2725 aa3.64□□□□□ -1.83
DDB1-219ENST00000541513 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.63□□□□□ -1.83
DDB1-219ENST00000541513 UBE2L5PA0A1B0GUS4 154 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 MDFIC2A0A1B0GVS7 189 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 SNRPGP15A8MWD9 76 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 ZNF736B4DX44 427 aaPredicted RBP3.63□□□□□ -1.83
DDB1-219ENST00000541513 LECT2O14960 151 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 SH2D1AO60880 128 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 SAA2P0DJI9 122 aaPredicted RBP3.63□□□□□ -1.83
DDB1-219ENST00000541513 UBE2L3P68036 154 aaKnown RBP3.63□□□□□ -1.83
DDB1-219ENST00000541513 PYDC2Q56P42 97 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 ZNF833PQ6ZTB9 187 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 SH2D6Q7Z4S9 175 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 MIR7-3HGQ8N6C7 128 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 TSKUQ8WUA8 353 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 ZNF355PQ9NSJ1 428 aa3.63□□□□□ -1.83
DDB1-219ENST00000541513 TRAV1-1A0A0B4J248 108 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 H3BUX3 64 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 SLC25A20O43772 301 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 PPYP01298 95 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 IGKV1D-33P01593 117 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 IGKV1-33P01594 117 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 IGKV1-16P04430 117 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 EIF4EBP1Q13541 118 aaPredicted RBP3.62□□□□□ -1.83
DDB1-219ENST00000541513 KRTAP24-1Q3LI83 254 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 RPL39P5Q59GN2 51 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 ZFP2Q6ZN57 461 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 C5orf38Q86SI9 138 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 NABP2Q9BQ15 211 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 NPCDR1Q9BY65 106 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 FXYD6Q9H0Q3 95 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 HILPDAQ9Y5L2 63 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 WNK1Q9H4A3 2382 aa3.62□□□□□ -1.83
DDB1-219ENST00000541513 hADV29S1A0JD25 119 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 H3BMM0 161 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 TIMM17BO60830 172 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 TRGV3P03979 118 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 CRIP2P52943 208 aaPredicted RBP3.61□□□□□ -1.83
DDB1-219ENST00000541513 KRTAP21-3Q3LHN1 58 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
DDB1-219ENST00000541513 ZNF818PQ6ZRF7 136 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 TOMM5Q8N4H5 51 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 Q8N6K4 173 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 UBE2WQ96B02 151 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 RNF5Q99942 180 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 CYTL1Q9NRR1 136 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 ANK2Q01484 3957 aa3.61□□□□□ -1.83
DDB1-219ENST00000541513 FXYD6-FXYD2A0A087WZ82 144 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 C11orf94C9JXX5 98 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 NUPR1O60356 82 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 NDUFA3O95167 84 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 NPYP01303 97 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 FXYD4P59646 89 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 LY6EQ16553 131 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 Q5W150 140 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 SMCR5Q8TEV8 140 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 OSTCQ9NRP0 149 aa3.6□□□□□ -1.83
DDB1-219ENST00000541513 TRAV2A0A0B4J234 112 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 A6NED7 52 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 CD24P25063 80 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 SS18Q15532 418 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 Q6ZQT7 251 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 TMEM136Q6ZRR5 245 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 SERP2Q8N6R1 65 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 C5orf56Q8N8D9 126 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 TVP23CQ96ET8 276 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 TRAPPC1Q9Y5R8 145 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 LY96Q9Y6Y9 160 aa3.59□□□□□ -1.83
DDB1-219ENST00000541513 VWFP04275 2813 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.58□□□□□ -1.84
DDB1-219ENST00000541513 IGKV2D-30A0A075B6S6 120 aa3.58□□□□□ -1.84
DDB1-219ENST00000541513 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms