RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 TGIF2-C20orf24A0A0A6YYL0 155 aa7.35□□□□□ -1.23
SNHG1-216ENST00000541416 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
SNHG1-216ENST00000541416 SPANXA1Q9NS26 97 aa7.35□□□□□ -1.23
SNHG1-216ENST00000541416 IFITM10A6NMD0 228 aa7.34□□□□□ -1.23
SNHG1-216ENST00000541416 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
SNHG1-216ENST00000541416 HBBP68871 147 aa7.34□□□□□ -1.23
SNHG1-216ENST00000541416 NRACQ8N912 160 aa7.34□□□□□ -1.23
SNHG1-216ENST00000541416 C20orf78Q9BR46 151 aa7.34□□□□□ -1.23
SNHG1-216ENST00000541416 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 LINC00862A6NCI5 91 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 C10orf25Q5T742 122 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 KRTAP11-1Q8IUC1 163 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-216ENST00000541416 SMIM7Q9BQ49 75 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 OSTCQ9NRP0 149 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 C6orf48Q9UBA6 75 aa7.33□□□□□ -1.24
SNHG1-216ENST00000541416 NDUFC2-KCTD14E9PQ53 114 aa7.32□□□□□ -1.24
SNHG1-216ENST00000541416 NUPR1O60356 82 aa7.32□□□□□ -1.24
SNHG1-216ENST00000541416 BLOC1S1P78537 153 aa7.32□□□□□ -1.24
SNHG1-216ENST00000541416 MRPS36P82909 103 aaKnown RBP7.32□□□□□ -1.24
SNHG1-216ENST00000541416 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
SNHG1-216ENST00000541416 ZNF861PO60384 105 aa7.31□□□□□ -1.24
SNHG1-216ENST00000541416 CKS2P33552 79 aa7.31□□□□□ -1.24
SNHG1-216ENST00000541416 RPL32P62910 135 aaKnown RBP7.31□□□□□ -1.24
SNHG1-216ENST00000541416 TRBV24-1A0A075B6N3 115 aa7.3□□□□□ -1.24
SNHG1-216ENST00000541416 TSPAN13O95857 204 aa7.3□□□□□ -1.24
SNHG1-216ENST00000541416 RPL39P62891 51 aaKnown RBP7.3□□□□□ -1.24
SNHG1-216ENST00000541416 LBHQ53QV2 105 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-216ENST00000541416 FAM104BQ5XKR9 115 aa7.3□□□□□ -1.24
SNHG1-216ENST00000541416 EIF5A2Q9GZV4 153 aaKnown RBP7.3□□□□□ -1.24
SNHG1-216ENST00000541416 NAT8BQ9UHF3 227 aa7.3□□□□□ -1.24
SNHG1-216ENST00000541416 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
SNHG1-216ENST00000541416 A0A1B0GW15 77 aa7.29□□□□□ -1.24
SNHG1-216ENST00000541416 ZNF727A8MUV8 499 aa7.29□□□□□ -1.24
SNHG1-216ENST00000541416 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-216ENST00000541416 MRPL51Q4U2R6 128 aaKnown RBP7.29□□□□□ -1.24
SNHG1-216ENST00000541416 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
SNHG1-216ENST00000541416 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
SNHG1-216ENST00000541416 F8W036 122 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 TNFRSF6BO95407 300 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 S100A8P05109 93 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 PRSS2P07478 247 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 CRYGAP11844 174 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 RAB5AP20339 215 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 RPL28P46779 137 aaKnown RBP7.27□□□□□ -1.25
SNHG1-216ENST00000541416 KIAA0087Q14695 138 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 TCTE3Q8IZS6 198 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 TYMSOSQ8TAI1 123 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 V9GYV3 84 aa7.27□□□□□ -1.25
SNHG1-216ENST00000541416 CKS1BP61024 79 aa7.26□□□□□ -1.25
SNHG1-216ENST00000541416 C9orf129Q5T035 196 aaKnown RBP7.26□□□□□ -1.25
SNHG1-216ENST00000541416 C2orf82Q6UX34 121 aa7.26□□□□□ -1.25
SNHG1-216ENST00000541416 LINC01561Q8N1V8 128 aa7.26□□□□□ -1.25
SNHG1-216ENST00000541416 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
SNHG1-216ENST00000541416 KRTAP9-6A0A140TA67 174 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 PPBPP02775 128 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 FAM74A3Q4VXF1 159 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 FAM104AQ969W3 186 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 PYGO1Q9Y3Y4 419 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
SNHG1-216ENST00000541416 D6R8Y8 96 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
SNHG1-216ENST00000541416 ALKAL2Q6UX46 152 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 TEX43Q6ZNM6 134 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 TMEM141Q96I45 108 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 CTDSP1Q9GZU7 261 aa7.24□□□□□ -1.25
SNHG1-216ENST00000541416 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
SNHG1-216ENST00000541416 Q6ZN92 141 aa7.23□□□□□ -1.25
SNHG1-216ENST00000541416 CDIP1Q9H305 208 aa7.23□□□□□ -1.25
SNHG1-216ENST00000541416 TP73-AS1Q9UF72 201 aa7.23□□□□□ -1.25
SNHG1-216ENST00000541416 SMIM27A0A1W2PRY6 76 aa7.22□□□□□ -1.25
SNHG1-216ENST00000541416 BCE1O60756 84 aa7.22□□□□□ -1.25
SNHG1-216ENST00000541416 MRPL55Q7Z7F7 128 aaKnown RBP7.22□□□□□ -1.25
SNHG1-216ENST00000541416 TOMM7Q9P0U1 55 aa7.22□□□□□ -1.25
SNHG1-216ENST00000541416 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 A0A087X002 238 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 NPYP01303 97 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 SRP19P09132 144 aaKnown RBP7.21□□□□□ -1.26
SNHG1-216ENST00000541416 ADIRFQ15847 76 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 ORMDL3Q8N138 153 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 LINC00469Q8N7U9 141 aa7.21□□□□□ -1.26
SNHG1-216ENST00000541416 Q8IZM0 81 aa7.2□□□□□ -1.26
SNHG1-216ENST00000541416 ALKBH7Q9BT30 221 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-216ENST00000541416 XAGE1AQ9HD64 81 aa7.2□□□□□ -1.26
SNHG1-216ENST00000541416 RPL23P62829 140 aaKnown RBP7.19□□□□□ -1.26
SNHG1-216ENST00000541416 SEC11AP67812 179 aa7.19□□□□□ -1.26
SNHG1-216ENST00000541416 MRPL54Q6P161 138 aaKnown RBP7.19□□□□□ -1.26
SNHG1-216ENST00000541416 VCX2Q9H322 139 aa7.19□□□□□ -1.26
SNHG1-216ENST00000541416 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
SNHG1-216ENST00000541416 F8VRH5 84 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 CTAG1AP78358 180 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 TPRXLQ17RH7 258 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 LINC00304Q8N9R0 145 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 PRELID3AQ96N28 172 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 CYSLTR1Q9Y271 337 aa7.18□□□□□ -1.26
SNHG1-216ENST00000541416 NPSP0C0P6 89 aa7.17□□□□□ -1.26
SNHG1-216ENST00000541416 CXCL5P42830 114 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms